BLASTX nr result

ID: Glycyrrhiza24_contig00029864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029864
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   267   7e-70
ref|XP_003636002.1| Gamma-tubulin complex component [Medicago tr...   259   2e-67
emb|CBI21631.3| unnamed protein product [Vitis vinifera]              202   3e-50
ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...   202   3e-50
ref|XP_002515845.1| gamma-tubulin complex component, putative [R...   185   3e-45

>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  267 bits (682), Expect = 7e-70
 Identities = 132/146 (90%), Positives = 138/146 (94%)
 Frame = -3

Query: 438  LTVVSGGSSWERLLGNFRKTVNCDATQEQNLSSTFEMPLDIIIDKCLLQEIMLQYNYVSK 259
            LTVVSGGSSWERLLG+F KTVN D TQ+Q+L S FE+PLDIIIDKCLLQEIMLQYNYVSK
Sbjct: 780  LTVVSGGSSWERLLGSFGKTVNVDDTQKQSLLSAFEIPLDIIIDKCLLQEIMLQYNYVSK 839

Query: 258  LIINVLEEAFKLQEHLLALRRYHFMVLADWADLFILSLWHHKWSVAEANERLSEIQGLLE 79
            L INVLEEAFKLQEHLLALRRYHFM LADWADLFILSLWHHKWSV EANERLSEIQGLLE
Sbjct: 840  LAINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHHKWSVTEANERLSEIQGLLE 899

Query: 78   LSIQKSSCERDTNKDRLFVYMKGHGK 1
            LSIQKSSCE+DT+KDRLFVYMKGHGK
Sbjct: 900  LSIQKSSCEQDTHKDRLFVYMKGHGK 925


>ref|XP_003636002.1| Gamma-tubulin complex component [Medicago truncatula]
            gi|355501937|gb|AES83140.1| Gamma-tubulin complex
            component [Medicago truncatula]
          Length = 1206

 Score =  259 bits (662), Expect = 2e-67
 Identities = 128/146 (87%), Positives = 134/146 (91%)
 Frame = -3

Query: 438  LTVVSGGSSWERLLGNFRKTVNCDATQEQNLSSTFEMPLDIIIDKCLLQEIMLQYNYVSK 259
            LT  SGGSSW RLLG+FRKTV+CDATQ Q L STFEMPLDIIIDKCL+QEIM+QYNYVSK
Sbjct: 774  LTDTSGGSSWGRLLGSFRKTVDCDATQRQTLLSTFEMPLDIIIDKCLIQEIMVQYNYVSK 833

Query: 258  LIINVLEEAFKLQEHLLALRRYHFMVLADWADLFILSLWHHKWSVAEANERLSEIQGLLE 79
            LIINVLEEAFKLQEHLLALRRYHFM LADWADLFILSLW HKWSV EA ERL EIQGLLE
Sbjct: 834  LIINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWRHKWSVTEATERLPEIQGLLE 893

Query: 78   LSIQKSSCERDTNKDRLFVYMKGHGK 1
            LSIQKSSCE+DTNK+RLFVYMKG GK
Sbjct: 894  LSIQKSSCEQDTNKNRLFVYMKGRGK 919


>emb|CBI21631.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score =  202 bits (513), Expect = 3e-50
 Identities = 99/142 (69%), Positives = 114/142 (80%), Gaps = 1/142 (0%)
 Frame = -3

Query: 429  VSGGSSWERLLGNFRKTVNCDATQEQ-NLSSTFEMPLDIIIDKCLLQEIMLQYNYVSKLI 253
            VSGGSSWE LL +    VN    Q   +L   FEMPL+ II+KCLL EI+LQY YVSKL 
Sbjct: 648  VSGGSSWETLLASSGNAVNNSVGQHTLSLGGVFEMPLEFIINKCLLPEILLQYKYVSKLT 707

Query: 252  INVLEEAFKLQEHLLALRRYHFMVLADWADLFILSLWHHKWSVAEANERLSEIQGLLELS 73
            I +LEE F LQEH LALRRYHFM LADWADLFI+SLW+H+W+V EA++RLSEIQGLLELS
Sbjct: 708  IKLLEEGFDLQEHFLALRRYHFMELADWADLFIMSLWNHRWNVTEADQRLSEIQGLLELS 767

Query: 72   IQKSSCERDTNKDRLFVYMKGH 7
            +Q+SSCERD  KD+LFVYMKGH
Sbjct: 768  LQRSSCERDLKKDKLFVYMKGH 789


>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score =  202 bits (513), Expect = 3e-50
 Identities = 99/142 (69%), Positives = 114/142 (80%), Gaps = 1/142 (0%)
 Frame = -3

Query: 429  VSGGSSWERLLGNFRKTVNCDATQEQ-NLSSTFEMPLDIIIDKCLLQEIMLQYNYVSKLI 253
            VSGGSSWE LL +    VN    Q   +L   FEMPL+ II+KCLL EI+LQY YVSKL 
Sbjct: 844  VSGGSSWETLLASSGNAVNNSVGQHTLSLGGVFEMPLEFIINKCLLPEILLQYKYVSKLT 903

Query: 252  INVLEEAFKLQEHLLALRRYHFMVLADWADLFILSLWHHKWSVAEANERLSEIQGLLELS 73
            I +LEE F LQEH LALRRYHFM LADWADLFI+SLW+H+W+V EA++RLSEIQGLLELS
Sbjct: 904  IKLLEEGFDLQEHFLALRRYHFMELADWADLFIMSLWNHRWNVTEADQRLSEIQGLLELS 963

Query: 72   IQKSSCERDTNKDRLFVYMKGH 7
            +Q+SSCERD  KD+LFVYMKGH
Sbjct: 964  LQRSSCERDLKKDKLFVYMKGH 985


>ref|XP_002515845.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223545000|gb|EEF46514.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 1209

 Score =  185 bits (470), Expect = 3e-45
 Identities = 91/142 (64%), Positives = 110/142 (77%), Gaps = 1/142 (0%)
 Frame = -3

Query: 429  VSGGSSWERLLGNFRKTVNCDAT-QEQNLSSTFEMPLDIIIDKCLLQEIMLQYNYVSKLI 253
            V GG SWE LL  F       A+ Q+ +LS+ F++PLD IIDKC+LQEI+LQY YVSKL 
Sbjct: 820  VYGGRSWESLLSKFSFIEKGSASEQKHSLSAMFDIPLDFIIDKCMLQEILLQYKYVSKLA 879

Query: 252  INVLEEAFKLQEHLLALRRYHFMVLADWADLFILSLWHHKWSVAEANERLSEIQGLLELS 73
            I +LE  F L EH   LRRY+FM +ADWADLFI+SLWHHKW   EA +R+SEIQGLLELS
Sbjct: 880  IKILE-GFDLHEHYRVLRRYYFMEIADWADLFIMSLWHHKWRTTEAGQRVSEIQGLLELS 938

Query: 72   IQKSSCERDTNKDRLFVYMKGH 7
            +Q+SSCERD NKDRL+VY+KG+
Sbjct: 939  VQRSSCERDPNKDRLYVYIKGN 960


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