BLASTX nr result

ID: Glycyrrhiza24_contig00029843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029843
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   248   3e-64
ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group] g...   162   2e-38
gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japo...   162   2e-38
gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indi...   161   6e-38
gb|ADE77588.1| unknown [Picea sitchensis]                             160   1e-37

>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  248 bits (634), Expect = 3e-64
 Identities = 119/137 (86%), Positives = 125/137 (91%)
 Frame = -1

Query: 411 EKGLEFYEQMKVAGIRPNKVTFISLLAACSHAGLLDRGWMLYNSMINDYGIEPDMEHYSC 232
           EKGL FYEQMK  G RPNKVTFISLL+ACSHAGLLDRGW+LYNSMINDYGIEP+MEHYSC
Sbjct: 518 EKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSC 577

Query: 231 MVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAELLAEHIFQLNAED 52
           MVDLIGRAGD+DGAYKFITRMP+ PDANV GSLLGAC LHNKVEL ELLAE I QL A+D
Sbjct: 578 MVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADD 637

Query: 51  PGHYVLLSNLYASGKRW 1
            GHYVLLSNLYASGKRW
Sbjct: 638 SGHYVLLSNLYASGKRW 654


>ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
           gi|34394298|dbj|BAC84780.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza
           sativa Japonica Group]
          Length = 673

 Score =  162 bits (411), Expect = 2e-38
 Identities = 75/137 (54%), Positives = 101/137 (73%)
 Frame = -1

Query: 411 EKGLEFYEQMKVAGIRPNKVTFISLLAACSHAGLLDRGWMLYNSMINDYGIEPDMEHYSC 232
           ++ LE + +MK +G+RPN +TFIS+LAACSHAGLLD G   YN+M  ++GIE  +EHY C
Sbjct: 384 QEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGC 443

Query: 231 MVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAELLAEHIFQLNAED 52
           MVDL+GRAG +D AY  I  M V PDA + G+LL AC +H  VELAE+  + +F+L+A +
Sbjct: 444 MVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN 503

Query: 51  PGHYVLLSNLYASGKRW 1
            G+YVLLSN+YA  + W
Sbjct: 504 SGYYVLLSNIYAEARMW 520


>gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score =  162 bits (411), Expect = 2e-38
 Identities = 75/137 (54%), Positives = 101/137 (73%)
 Frame = -1

Query: 411 EKGLEFYEQMKVAGIRPNKVTFISLLAACSHAGLLDRGWMLYNSMINDYGIEPDMEHYSC 232
           ++ LE + +MK +G+RPN +TFIS+LAACSHAGLLD G   YN+M  ++GIE  +EHY C
Sbjct: 385 QEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGC 444

Query: 231 MVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAELLAEHIFQLNAED 52
           MVDL+GRAG +D AY  I  M V PDA + G+LL AC +H  VELAE+  + +F+L+A +
Sbjct: 445 MVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN 504

Query: 51  PGHYVLLSNLYASGKRW 1
            G+YVLLSN+YA  + W
Sbjct: 505 SGYYVLLSNIYAEARMW 521


>gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/137 (54%), Positives = 100/137 (72%)
 Frame = -1

Query: 411 EKGLEFYEQMKVAGIRPNKVTFISLLAACSHAGLLDRGWMLYNSMINDYGIEPDMEHYSC 232
           ++ LE + +MK +G+RPN +TFIS+LAACSHAGLLD G   YN+M  ++GIE  +EHY C
Sbjct: 239 QEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGC 298

Query: 231 MVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAELLAEHIFQLNAED 52
           MVDL+GRAG +D AY  I  M V PDA + G+LL AC +H  VELAE+  + +F+L+A +
Sbjct: 299 MVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN 358

Query: 51  PGHYVLLSNLYASGKRW 1
            G+YVLLSN+YA    W
Sbjct: 359 SGYYVLLSNIYAEAGMW 375


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  160 bits (405), Expect = 1e-37
 Identities = 71/137 (51%), Positives = 101/137 (73%)
 Frame = -1

Query: 411 EKGLEFYEQMKVAGIRPNKVTFISLLAACSHAGLLDRGWMLYNSMINDYGIEPDMEHYSC 232
           E  L  + QM+  G++PN++TFIS+L+ACSHAGL+D GW  YN M  DY I P +EHY+C
Sbjct: 23  EDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEGWKCYNCMTLDYAITPTVEHYAC 82

Query: 231 MVDLIGRAGDIDGAYKFITRMPVIPDANVLGSLLGACWLHNKVELAELLAEHIFQLNAED 52
           MVDL+GRAG ++ A+ FI +MP+ P A+V G+ LG+C +H  +EL E +AE +  L+ ++
Sbjct: 83  MVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDN 142

Query: 51  PGHYVLLSNLYASGKRW 1
            G+YVLLSN+YA+  RW
Sbjct: 143 AGYYVLLSNIYAAAGRW 159


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