BLASTX nr result

ID: Glycyrrhiza24_contig00029839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029839
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ...   199   2e-49
ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
emb|CBI27471.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   171   7e-41

>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513376|gb|AES94999.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  199 bits (506), Expect = 2e-49
 Identities = 92/109 (84%), Positives = 100/109 (91%)
 Frame = -3

Query: 328 GIKPTSITFTAILTACSHAGLIEEGKSLFESMSTAYNMNPAMEHYGCMVDLLGRAGLLKE 149
           GIKPTS TFTA+LTACSH GL+EEGKSLFESMST YNM P MEHYGCMVDLLGRAG LKE
Sbjct: 339 GIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKE 398

Query: 148 AKEFVDSMPVKPNAAIWGALLNACHLHEDLELGKEIGQILIELDPDHSG 2
           AKEFV+SMP+KPNAAIWG+LLNACHLH+ LELGKEIG+ LIELDP+H G
Sbjct: 399 AKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDG 447


>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/109 (84%), Positives = 101/109 (92%)
 Frame = -3

Query: 328 GIKPTSITFTAILTACSHAGLIEEGKSLFESMSTAYNMNPAMEHYGCMVDLLGRAGLLKE 149
           GI P SITFTAILTACSHAGL EEGKSLFESMS+ YN+ P+MEHYGCMVDL+GRAGLLKE
Sbjct: 338 GINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKE 397

Query: 148 AKEFVDSMPVKPNAAIWGALLNACHLHEDLELGKEIGQILIELDPDHSG 2
           A+EF++SMPVKPNAAIWGALLNAC LH+  ELGKEIG+ILIELDPDHSG
Sbjct: 398 AREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSG 446


>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  171 bits (432), Expect = 7e-41
 Identities = 76/109 (69%), Positives = 93/109 (85%)
 Frame = -3

Query: 328 GIKPTSITFTAILTACSHAGLIEEGKSLFESMSTAYNMNPAMEHYGCMVDLLGRAGLLKE 149
           G++P  +TFT ILTACSHAGL+ E K LFESM   +   P++EHYGCMVDLLGRAGLLKE
Sbjct: 298 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKE 357

Query: 148 AKEFVDSMPVKPNAAIWGALLNACHLHEDLELGKEIGQILIELDPDHSG 2
           A+E +++MPVKPNAAIWGALLNACH+H +LELGK+IG+ILI++DP H G
Sbjct: 358 AEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGG 406


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  171 bits (432), Expect = 7e-41
 Identities = 76/109 (69%), Positives = 93/109 (85%)
 Frame = -3

Query: 328 GIKPTSITFTAILTACSHAGLIEEGKSLFESMSTAYNMNPAMEHYGCMVDLLGRAGLLKE 149
           G++P  +TFT ILTACSHAGL+ E K LFESM   +   P++EHYGCMVDLLGRAGLLKE
Sbjct: 346 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKE 405

Query: 148 AKEFVDSMPVKPNAAIWGALLNACHLHEDLELGKEIGQILIELDPDHSG 2
           A+E +++MPVKPNAAIWGALLNACH+H +LELGK+IG+ILI++DP H G
Sbjct: 406 AEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGG 454


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  171 bits (432), Expect = 7e-41
 Identities = 76/109 (69%), Positives = 93/109 (85%)
 Frame = -3

Query: 328 GIKPTSITFTAILTACSHAGLIEEGKSLFESMSTAYNMNPAMEHYGCMVDLLGRAGLLKE 149
           G++P  +TFT ILTACSHAGL+ E K LFESM   +   P++EHYGCMVDLLGRAGLLKE
Sbjct: 346 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKE 405

Query: 148 AKEFVDSMPVKPNAAIWGALLNACHLHEDLELGKEIGQILIELDPDHSG 2
           A+E +++MPVKPNAAIWGALLNACH+H +LELGK+IG+ILI++DP H G
Sbjct: 406 AEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGG 454


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