BLASTX nr result

ID: Glycyrrhiza24_contig00029819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029819
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containin...   155   3e-36
ref|XP_003629342.1| Zinc finger CCCH domain-containing protein [...   130   1e-28
ref|XP_002327763.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002530750.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16

>ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Glycine max]
          Length = 520

 Score =  155 bits (393), Expect = 3e-36
 Identities = 74/94 (78%), Positives = 80/94 (85%)
 Frame = +2

Query: 2   YYKNLVRQHGADKQHKQDSQIGIHHSNFQDLKPVHNIKQGDVKHKIQKPCIYFKSSRGCR 181
           YYKNL+RQHGADKQ  QDS IGI HSNFQD+KPVHNIKQ +VK KI KPCIYFKS RGCR
Sbjct: 426 YYKNLIRQHGADKQDIQDSHIGIRHSNFQDMKPVHNIKQREVKPKILKPCIYFKSPRGCR 485

Query: 182 NGSNCPYLHEVSVQWGSGNVLGAQNAKRLKLGTE 283
           NGSNC Y H+VS Q G+GNVL AQ+AKRLKLG E
Sbjct: 486 NGSNCSYQHDVSAQEGAGNVLRAQSAKRLKLGGE 519


>ref|XP_003629342.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355523364|gb|AET03818.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 594

 Score =  130 bits (328), Expect = 1e-28
 Identities = 58/85 (68%), Positives = 69/85 (81%)
 Frame = +2

Query: 2   YYKNLVRQHGADKQHKQDSQIGIHHSNFQDLKPVHNIKQGDVKHKIQKPCIYFKSSRGCR 181
           YYKNL+RQHGAD Q K DSQIG HHSNFQD+K  HN  QG+VK+K +K CIYF SSRGCR
Sbjct: 467 YYKNLIRQHGADGQDKLDSQIGSHHSNFQDMKLAHNNNQGEVKYKSKKQCIYFNSSRGCR 526

Query: 182 NGSNCPYLHEVSVQWGSGNVLGAQN 256
           NGS+CP+ H+VS + G+GN LG Q+
Sbjct: 527 NGSDCPFQHDVSAESGAGNFLGGQS 551


>ref|XP_002327763.1| predicted protein [Populus trichocarpa] gi|222836848|gb|EEE75241.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 46/95 (48%), Positives = 65/95 (68%)
 Frame = +2

Query: 2   YYKNLVRQHGADKQHKQDSQIGIHHSNFQDLKPVHNIKQGDVKHKIQKPCIYFKSSRGCR 181
           Y KNL+R+HG  K+  QD   G H++  Q+ + + NIK+ + KHK QKPC+YFK+ +GCR
Sbjct: 439 YIKNLIREHGTAKKEIQDRN-GRHYNQTQNQELIQNIKKRESKHKSQKPCMYFKTPKGCR 497

Query: 182 NGSNCPYLHEVSVQWGSGNVLGAQNAKRLKLGTEI 286
           NG NCP+ H+ S Q+ +G+ L A  AKR+K   EI
Sbjct: 498 NGFNCPFQHDPSFQFQTGSALDAPVAKRMKFSGEI 532


>ref|XP_002530750.1| conserved hypothetical protein [Ricinus communis]
           gi|223529714|gb|EEF31656.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 497

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/95 (46%), Positives = 64/95 (67%)
 Frame = +2

Query: 2   YYKNLVRQHGADKQHKQDSQIGIHHSNFQDLKPVHNIKQGDVKHKIQKPCIYFKSSRGCR 181
           Y K+L+R+HG+DK ++  S  G H +N   +K      Q +++ K QKPC+Y++S +GCR
Sbjct: 402 YIKDLIREHGSDKHNEHMSYNGPHATNHILIK---EFGQNNLRPKFQKPCMYYRSPKGCR 458

Query: 182 NGSNCPYLHEVSVQWGSGNVLGAQNAKRLKLGTEI 286
           NGSNCPY H++S Q+ +G  L A  AKR+KL  EI
Sbjct: 459 NGSNCPYQHDLSFQFQTGGNLEAPYAKRMKLDGEI 493


>ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|222843717|gb|EEE81264.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 43/95 (45%), Positives = 56/95 (58%)
 Frame = +2

Query: 2   YYKNLVRQHGADKQHKQDSQIGIHHSNFQDLKPVHNIKQGDVKHKIQKPCIYFKSSRGCR 181
           YYKNL++QHG DKQ         ++      + + N K  + KHKI KPCIYF SSRGCR
Sbjct: 329 YYKNLIQQHGGDKQETPQQFGSRYNHQVGTSQDLVNSKSRESKHKIMKPCIYFNSSRGCR 388

Query: 182 NGSNCPYLHEVSVQWGSGNVLGAQNAKRLKLGTEI 286
           NG NC Y H+ S Q     +   Q++KR+K+  EI
Sbjct: 389 NGVNCAYQHDSSSQQKGSGITEVQSSKRMKMDREI 423


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