BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029804
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611888.1| Pentatricopeptide repeat-containing protein ...   153   2e-35
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   117   1e-24
emb|CBI17585.3| unnamed protein product [Vitis vinifera]              110   9e-23

>ref|XP_003611888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513223|gb|AES94846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 659

 Score =  153 bits (386), Expect = 2e-35
 Identities = 77/103 (74%), Positives = 89/103 (86%)
 Frame = -1

Query: 311 KLMEAMEVFNVLPSMRIKRTLKQYSVLFEGFAGSKRFDEVRILVNEMQVDGILSSREMSL 132
           K +EA+EVFN+LP MRIKRTLKQYSVL EG  GSK FDEV +LVNEMQVDGIL SR +SL
Sbjct: 227 KFLEAIEVFNLLPLMRIKRTLKQYSVLIEGLVGSKMFDEVGVLVNEMQVDGILPSRTVSL 286

Query: 131 SLQQMQEEGFLKDMDELFREISPDERIKNVRYSIDSSDENENE 3
            LQQ+++EGFLKD+DELF  I PDERIK+V +SIDSSDE+ENE
Sbjct: 287 LLQQVKDEGFLKDVDELFEGICPDERIKSVSFSIDSSDEDENE 329


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/105 (72%), Positives = 87/105 (82%)
 Frame = -1

Query: 317 SMKLMEAMEVFNVLPSMRIKRTLKQYSVLFEGFAGSKRFDEVRILVNEMQVDGILSSREM 138
           S KL EA+EVFN+LPSMRIKRTL+QYSVL EGF GSK+FDEVRILV EMQVDGIL SR M
Sbjct: 226 SRKLSEALEVFNLLPSMRIKRTLRQYSVLLEGFVGSKQFDEVRILVEEMQVDGILPSRGM 285

Query: 137 SLSLQQMQEEGFLKDMDELFREISPDERIKNVRYSIDSSDENENE 3
            L LQQM+EEG L+  ++L R I PDE I++V YSIDS DE+ENE
Sbjct: 286 GLLLQQMKEEGILEGKEQLLRGILPDETIRSVSYSIDSGDEDENE 330


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/105 (57%), Positives = 80/105 (76%)
 Frame = -1

Query: 317 SMKLMEAMEVFNVLPSMRIKRTLKQYSVLFEGFAGSKRFDEVRILVNEMQVDGILSSREM 138
           S KL  A++VFN+LP MRI+RTL+QYS+L E F    RFD V+ L++EMQ+DGIL  R M
Sbjct: 219 SGKLDSAIKVFNILPLMRIRRTLRQYSILVEEFTSINRFDVVKALLDEMQIDGILPGRAM 278

Query: 137 SLSLQQMQEEGFLKDMDELFREISPDERIKNVRYSIDSSDENENE 3
            LSLQ+MQE GF+ + DE  R + PDERIKNV + +DSSD++++E
Sbjct: 279 QLSLQRMQEAGFVHETDEFLRGMLPDERIKNVGFCVDSSDDDDDE 323


>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/103 (57%), Positives = 78/103 (75%)
 Frame = -1

Query: 311 KLMEAMEVFNVLPSMRIKRTLKQYSVLFEGFAGSKRFDEVRILVNEMQVDGILSSREMSL 132
           KL  A+EVF+VLP MRIKRTLKQYSVL +GF G +RFDEV+ LVNEM+VDG    R M  
Sbjct: 222 KLDSAIEVFSVLPLMRIKRTLKQYSVLVDGFVGVERFDEVKKLVNEMKVDGKFPGRAMHS 281

Query: 131 SLQQMQEEGFLKDMDELFREISPDERIKNVRYSIDSSDENENE 3
           +LQ+MQE GF+++  E  +E+ PDERIK++    D SD++E++
Sbjct: 282 ALQRMQEAGFVEETKEFVKEMFPDERIKSIGSCSDGSDDDEDD 324


>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/96 (57%), Positives = 71/96 (73%)
 Frame = -1

Query: 317 SMKLMEAMEVFNVLPSMRIKRTLKQYSVLFEGFAGSKRFDEVRILVNEMQVDGILSSREM 138
           S KL  A++VFN+LP MRI+RTL+QYS+L E F    RFD V+ L++EMQ+DGIL  R M
Sbjct: 219 SGKLDSAIKVFNILPLMRIRRTLRQYSILVEEFTSINRFDVVKALLDEMQIDGILPGRAM 278

Query: 137 SLSLQQMQEEGFLKDMDELFREISPDERIKNVRYSI 30
            LSLQ+MQE GF+ + DE  R + PDERIKNV + +
Sbjct: 279 QLSLQRMQEAGFVHETDEFLRGMLPDERIKNVGFCL 314