BLASTX nr result

ID: Glycyrrhiza24_contig00029799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029799
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537199.1| PREDICTED: uncharacterized protein LOC100818...    92   3e-17
ref|XP_003553324.1| PREDICTED: uncharacterized protein LOC100811...    91   1e-16
gb|ADN34073.1| retrotransposon protein [Cucumis melo subsp. melo]      90   2e-16
gb|ABF81447.1| NBS type disease resistance protein [Populus tric...    89   3e-16
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...    88   6e-16

>ref|XP_003537199.1| PREDICTED: uncharacterized protein LOC100818558 [Glycine max]
          Length = 1228

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/81 (56%), Positives = 54/81 (66%)
 Frame = -1

Query: 268 DDLLVTGSNPVIIEGFKGSMKSEFEMTDLGILNHFLGLEFAYTKKGIVLHQRRYIQEVLR 89
           DDLLVTGSN   I+ FK  M  EFEM DLG L+HFLGLEF   + G+ +HQ RY  EVL+
Sbjct: 39  DDLLVTGSNEKEIQVFKQFMMDEFEMIDLGKLSHFLGLEFNQVQNGVSMHQNRYAHEVLK 98

Query: 88  RFSMEKCNEAVTPVESNCKLQ 26
           RF M  CN + TP E   KL+
Sbjct: 99  RFGMLNCNPSSTPAEPGLKLE 119


>ref|XP_003553324.1| PREDICTED: uncharacterized protein LOC100811625 [Glycine max]
          Length = 1135

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/89 (49%), Positives = 61/89 (68%)
 Frame = -1

Query: 268 DDLLVTGSNPVIIEGFKGSMKSEFEMTDLGILNHFLGLEFAYTKKGIVLHQRRYIQEVLR 89
           DDLLVTGS+   I  FKG +  EFEM+DLG L++FLG+EF  T K I +HQ++Y +++L+
Sbjct: 266 DDLLVTGSSKEDIRVFKGRIIDEFEMSDLGELSYFLGIEFVSTSKEIFMHQKKYAEDILK 325

Query: 88  RFSMEKCNEAVTPVESNCKLQLIESESGV 2
           RF+M  CN  +T +E   KLQ+   E  V
Sbjct: 326 RFNMMDCNSVITLIEIGIKLQIDGDEKEV 354


>gb|ADN34073.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 479

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/80 (51%), Positives = 58/80 (72%)
 Frame = -1

Query: 268 DDLLVTGSNPVIIEGFKGSMKSEFEMTDLGILNHFLGLEFAYTKKGIVLHQRRYIQEVLR 89
           DDL+ TG++ ++ E FK SM +EFEM DLG++++FLG+E   +  GI ++Q++Y  E+L 
Sbjct: 291 DDLIYTGNDLIMFEEFKQSMMAEFEMIDLGMMHYFLGIEVIQSVAGIFINQKKYALEILD 350

Query: 88  RFSMEKCNEAVTPVESNCKL 29
           RF ME CN A TPVE N KL
Sbjct: 351 RFQMENCNSATTPVEPNLKL 370


>gb|ABF81447.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 972

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/81 (48%), Positives = 57/81 (70%)
 Frame = -1

Query: 268 DDLLVTGSNPVIIEGFKGSMKSEFEMTDLGILNHFLGLEFAYTKKGIVLHQRRYIQEVLR 89
           DDL+ TG+NP + + FK +M  EFEMTD+G+++HFLGLE    ++GI + Q  Y +++L 
Sbjct: 181 DDLIFTGNNPTMFDDFKQNMVHEFEMTDIGLMSHFLGLEVTQKEEGIFVSQSGYAKDILE 240

Query: 88  RFSMEKCNEAVTPVESNCKLQ 26
           RF ME CN   TPVE+  +L+
Sbjct: 241 RFKMESCNPVSTPVENGVELR 261


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = -1

Query: 268 DDLLVTGSNPVIIEGFKGSMKSEFEMTDLGILNHFLGLEFAYTKKGIVLHQRRYIQEVLR 89
           DDL+ TG+NP + E FK SM  EF+MTD+G+++++LG+E   T+ GI + Q RY +EVL+
Sbjct: 724 DDLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTKEVLK 783

Query: 88  RFSMEKCNEAVTPVESNCKL 29
           +F+M  CN   TP+E   KL
Sbjct: 784 KFNMLDCNPVNTPMEGGLKL 803


Top