BLASTX nr result

ID: Glycyrrhiza24_contig00029792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029792
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   184   5e-45
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos...   182   3e-44
ref|XP_003629079.1| Structural maintenance of chromosomes protei...   182   3e-44
ref|XP_002534418.1| Structural maintenance of chromosome, putati...   164   9e-39
ref|XP_002323859.1| condensin complex components subunit [Populu...   162   3e-38

>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1319

 Score =  184 bits (468), Expect = 5e-45
 Identities = 100/148 (67%), Positives = 109/148 (73%)
 Frame = -3

Query: 445  KQLDSLEAASKPQEDELDRLKELKKIISAEEREINRLTDGSRQLKEKVSELQRNIENAGG 266
            KQLDSLEAAS PQEDELDRLKELKKI+SAEEREINRL +GS+QLKEK  ELQRN+EN GG
Sbjct: 858  KQLDSLEAASTPQEDELDRLKELKKIVSAEEREINRLNNGSKQLKEKALELQRNLENVGG 917

Query: 265  EXXXXXXXXXXXXXSDIDKNSSEINRHKVQIETGQKMMKKLTKGIXXXXXXXXXXXXXXX 86
            E             SDID+NSSE NRHKVQIETGQKM+KKLTKGI               
Sbjct: 918  EKLKSQKSKVQKIQSDIDRNSSETNRHKVQIETGQKMVKKLTKGIEDSKKEKDRLTEQKE 977

Query: 85   XXKANFKEIEQKAFVVQENYKRTQEMID 2
                 FKEIEQKAFVVQENYK+TQ++ID
Sbjct: 978  KLTQAFKEIEQKAFVVQENYKKTQKVID 1005


>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1242

 Score =  182 bits (461), Expect = 3e-44
 Identities = 100/148 (67%), Positives = 109/148 (73%)
 Frame = -3

Query: 445  KQLDSLEAASKPQEDELDRLKELKKIISAEEREINRLTDGSRQLKEKVSELQRNIENAGG 266
            KQLDSLEAAS PQEDELDR+KELKKI+SAEEREINRLT+GS+QLKEK  ELQRN+EN GG
Sbjct: 781  KQLDSLEAASMPQEDELDRMKELKKIVSAEEREINRLTNGSKQLKEKALELQRNLENVGG 840

Query: 265  EXXXXXXXXXXXXXSDIDKNSSEINRHKVQIETGQKMMKKLTKGIXXXXXXXXXXXXXXX 86
            E             SDIDK+SS INR KVQIETGQKM+KKLTKGI               
Sbjct: 841  EKLKSQKSKVQKIQSDIDKHSSGINRCKVQIETGQKMVKKLTKGIEDSKKEKDRLTEQKE 900

Query: 85   XXKANFKEIEQKAFVVQENYKRTQEMID 2
                 FKEIEQKAFVVQENYK+TQE+ID
Sbjct: 901  KLTQAFKEIEQKAFVVQENYKKTQELID 928


>ref|XP_003629079.1| Structural maintenance of chromosomes protein [Medicago truncatula]
            gi|355523101|gb|AET03555.1| Structural maintenance of
            chromosomes protein [Medicago truncatula]
          Length = 1252

 Score =  182 bits (461), Expect = 3e-44
 Identities = 101/147 (68%), Positives = 109/147 (74%)
 Frame = -3

Query: 445  KQLDSLEAASKPQEDELDRLKELKKIISAEEREINRLTDGSRQLKEKVSELQRNIENAGG 266
            KQL SLE AS PQE+ELDRLKEL KIISAEEREINRLTDGS++LKEKVSELQ+ IENAGG
Sbjct: 782  KQLGSLEVASNPQENELDRLKELMKIISAEEREINRLTDGSKKLKEKVSELQKKIENAGG 841

Query: 265  EXXXXXXXXXXXXXSDIDKNSSEINRHKVQIETGQKMMKKLTKGIXXXXXXXXXXXXXXX 86
            E             SDIDK SSEINRHKVQIETGQKMMKKLTKGI               
Sbjct: 842  EKLKSQKLKVQKIQSDIDKASSEINRHKVQIETGQKMMKKLTKGIEESKKEKERLAEERE 901

Query: 85   XXKANFKEIEQKAFVVQENYKRTQEMI 5
              K NFKEIEQKAF VQ+NY++T+EMI
Sbjct: 902  KLKGNFKEIEQKAFAVQKNYEKTEEMI 928


>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
            gi|223525329|gb|EEF27966.1| Structural maintenance of
            chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  164 bits (414), Expect = 9e-39
 Identities = 91/148 (61%), Positives = 106/148 (71%)
 Frame = -3

Query: 445  KQLDSLEAASKPQEDELDRLKELKKIISAEEREINRLTDGSRQLKEKVSELQRNIENAGG 266
            KQL SLEAAS+P++DELDRLKELKKIIS+EE EI+RLT GS++LKEK  ELQ  IENAGG
Sbjct: 784  KQLGSLEAASQPKKDELDRLKELKKIISSEEMEIDRLTQGSKKLKEKALELQNKIENAGG 843

Query: 265  EXXXXXXXXXXXXXSDIDKNSSEINRHKVQIETGQKMMKKLTKGIXXXXXXXXXXXXXXX 86
            E             S+IDK S+EINR KVQIET QKM+KKLTKGI               
Sbjct: 844  ETLKAQKAKVKKIQSEIDKTSTEINRQKVQIETNQKMIKKLTKGIEDSKKEKDRFVEEKE 903

Query: 85   XXKANFKEIEQKAFVVQENYKRTQEMID 2
              K+ FKEIE+KAF VQENYK+TQ++ID
Sbjct: 904  KLKSVFKEIEEKAFAVQENYKKTQQLID 931


>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
            gi|222866861|gb|EEF03992.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1256

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/148 (59%), Positives = 105/148 (70%)
 Frame = -3

Query: 445  KQLDSLEAASKPQEDELDRLKELKKIISAEEREINRLTDGSRQLKEKVSELQRNIENAGG 266
            KQL SL+AAS+P++DELDRL+ELK+II  EE+EI+RL  GS++LKEK  ELQ  IENAGG
Sbjct: 789  KQLGSLKAASEPKKDELDRLEELKRIIVTEEKEIDRLIQGSKKLKEKALELQSKIENAGG 848

Query: 265  EXXXXXXXXXXXXXSDIDKNSSEINRHKVQIETGQKMMKKLTKGIXXXXXXXXXXXXXXX 86
            E             SD+DKNS+EINRHKVQIETG KM+KKLTKGI               
Sbjct: 849  ERLKSQKAKVNRIQSDMDKNSTEINRHKVQIETGHKMIKKLTKGIEDSRKEKERLTEERE 908

Query: 85   XXKANFKEIEQKAFVVQENYKRTQEMID 2
              +  FKEIE+KAF VQENYK+TQE+ID
Sbjct: 909  KLRGIFKEIEEKAFAVQENYKKTQELID 936


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