BLASTX nr result

ID: Glycyrrhiza24_contig00029758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029758
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-60
emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]   218   2e-54
ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putat...   214   2e-53
emb|CBI30363.3| unnamed protein product [Vitis vinifera]              196   7e-48
ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843...   134   3e-29

>ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|222854422|gb|EEE91969.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  237 bits (605), Expect = 2e-60
 Identities = 133/288 (46%), Positives = 181/288 (62%), Gaps = 11/288 (3%)
 Frame = -3

Query: 832 LYIGNLSEHVRGEELERVFRRFGHCNVRMKREGYGFVVFDFPSDAEKALRALKGRNICGE 653
           L+IGNLS H+R +ELERVF+RFG CNVRMK +GYGFVV++FP +AEKALRAL  RNICG+
Sbjct: 3   LHIGNLSSHIRRDELERVFQRFGRCNVRMK-DGYGFVVYEFPPNAEKALRALHKRNICGK 61

Query: 652 PLTLMWSNKQPKSHFPKFARGGGGRSTYELHSARDSDRLG-YGRRKTGFSGWRNHKIGVD 476
           PLTL WSNKQP+    +FAR      +YE     +SDR G + +RK G +  +++++   
Sbjct: 62  PLTLSWSNKQPRP-LKRFARTD---RSYEPQHRGNSDRGGDHVKRKLGSNDQQDYRLSFT 117

Query: 475 GRGKSVDVSGG-----EERGYHQDDY-DGEEKDHGG---DYPDEGGGVVPNREDNVTWGE 323
              ++  +        EE   HQDD  D   K+H G   D+ DE G V P+  DN  WGE
Sbjct: 118 QADRNSRIPSSADMHQEEIVNHQDDIEDHTNKEHQGYREDFLDERGRVGPDPMDNDRWGE 177

Query: 322 PTHDTPIDNGNGNAIEFDRYEPYHGYDKKHDSEDNHAGYPRGYPA-ANSQENIGRAQIGE 146
             H+ P + G  N +EFDRY+PY G+D++++ E+    Y  G  A  +SQEN G     +
Sbjct: 178 QFHNPPNEVGVENGVEFDRYDPYEGFDRRNNDENLQKAYSGGTLALQSSQENAGGDHASD 237

Query: 145 ETSNHPNDSKFQQTCYRCGDTGHKMRNCPKEHSSWRNYNMLDVRQDNN 2
            T N  +D K Q+TCY+CG +GHKMRNCP+E++S RN    D R  ++
Sbjct: 238 ATLNRLSDVKSQETCYKCGGSGHKMRNCPQENASQRNVTRFDSRHTDD 285


>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
          Length = 685

 Score =  218 bits (554), Expect = 2e-54
 Identities = 125/289 (43%), Positives = 171/289 (59%), Gaps = 13/289 (4%)
 Frame = -3

Query: 832 LYIGNLSEHVRGEELERVFRRFGHCNVRMKREGYGFVVFDFPSDAEKALRALKGRNICGE 653
           LY+GNLS H+R ++LERVF RFG CN+++K +GYGF V+DFP++A+KA+RA++G+NICGE
Sbjct: 3   LYLGNLSSHIRRDDLERVFWRFGRCNIQLK-DGYGFAVYDFPANADKAMRAMRGKNICGE 61

Query: 652 PLTLMWSNKQPKSHFPKFARGGGGRSTYELHSARDSDRLGYGRRKTGFSGWRNHKIGV-- 479
            ++L WSNKQP+           G  +YEL   R S+      RK G    R +K GV  
Sbjct: 62  RISLTWSNKQPRG-------XQRGARSYELQRGRXSN------RKLGSKSQRGYKXGVKK 108

Query: 478 ---DGRGKSVDVSGGEERGYHQD---DYDGEEKDH--GGDYPDEGGGVVPNREDNVTWGE 323
              DG          EER Y+QD   DY GEE  H  G +   EGG + P+  DN  WG+
Sbjct: 109 LDRDGYRSDAVEMLDEERSYNQDNIKDY-GEENHHNAGENLSYEGGSIEPDAVDNDRWGQ 167

Query: 322 PTHDTPIDNGNG--NAIEFDRYEPYHGYDKKHDSEDNHAGYPRGYPAANS-QENIGRAQI 152
             H   + NGNG  N +EFDRYEPYHG D+ ++ ++    Y  G P   S QE  GR QI
Sbjct: 168 --HVGNLSNGNGLENGMEFDRYEPYHGEDRSNEXDNIQMTYSGGSPTLRSTQEKTGREQI 225

Query: 151 GEETSNHPNDSKFQQTCYRCGDTGHKMRNCPKEHSSWRNYNMLDVRQDN 5
           G+      N  K Q  CY CG  GHKMRNC + ++S + ++  D+++++
Sbjct: 226 GDAILLPSNIPKPQLXCYHCGRPGHKMRNCLQGNASQKKFSRFDLKRND 274


>ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
           gi|223530325|gb|EEF32219.1| Splicing factor,
           arginine/serine-rich, putative [Ricinus communis]
          Length = 676

 Score =  214 bits (544), Expect = 2e-53
 Identities = 120/280 (42%), Positives = 164/280 (58%), Gaps = 4/280 (1%)
 Frame = -3

Query: 832 LYIGNLSEHVRGEELERVFRRFGHCNVRMKREGYGFVVFDFPSDAEKALRALKGRNICGE 653
           LYIGNLS  +R +ELERVF+RFG C+VR+K +GYGFVV++FP +AEKALRAL+ ++ICGE
Sbjct: 3   LYIGNLSSRIRRDELERVFQRFGQCDVRLK-DGYGFVVYEFPPNAEKALRALEKKHICGE 61

Query: 652 PLTLMWSNKQPKSHFPKFARGGGGRSTYELHSARDSDRLGYGRRKTGFSGWRNHKIGVDG 473
            L L WSNKQP+  F + AR GG   +YE   +RDS +   G     +        G   
Sbjct: 62  ALNLTWSNKQPR-QFNRLARAGG--RSYEPQHSRDSVKGKLGSNVLDYRTSVKQSDGFSK 118

Query: 472 RGKSVDVSGGE---ERGYHQDDYDGEEKDHGGDYPDEGGGVVPNREDNVTWGEPTHDTPI 302
           R  S ++   E   ++   +D++  E   +  ++  EGG    +R +N  WGE  H    
Sbjct: 119 RSASTNMRDKEVMYDKNRAKDNFGDEHSGYREEFLGEGGRFESDRVENDRWGEQLHYQLN 178

Query: 301 DNGNGNAIEFDRYEPYHGYDKKHDSEDNHAGYPRGYPA-ANSQENIGRAQIGEETSNHPN 125
           +NG  N + F+RYEP   Y++K+DS  +   Y  G PA    Q++IGR    E       
Sbjct: 179 ENGLKNDVVFERYEPCPDYERKYDSGVHQLAYRGGSPALRRPQKDIGRDNSNEVNLKCSR 238

Query: 124 DSKFQQTCYRCGDTGHKMRNCPKEHSSWRNYNMLDVRQDN 5
           D+ FQ TCY+CG +GHKMRNCP+E SS RN    D R D+
Sbjct: 239 DANFQATCYQCGGSGHKMRNCPQESSSLRNSTRSDPRHDD 278


>emb|CBI30363.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  196 bits (497), Expect = 7e-48
 Identities = 119/289 (41%), Positives = 165/289 (57%), Gaps = 13/289 (4%)
 Frame = -3

Query: 832 LYIGNLSEHVRGEELERVFRRFGHCNVRMKREGYGFVVFDFPSDAEKALRALKGRNICGE 653
           LY+GNLS H+R ++LERVF RFG CN+++K +GYGF V+DFP++A+KA+RA++G+NICGE
Sbjct: 3   LYLGNLSSHIRRDDLERVFWRFGRCNIQLK-DGYGFAVYDFPANADKAMRAMRGKNICGE 61

Query: 652 PLTLMWSNKQPKSHFPKFARGGGGRSTYELHSARDSDRLGYGRRKTGFSGWRNHKIGV-- 479
            ++L WSNKQP+     F RG     +YEL   R S+      RK G    R +K+GV  
Sbjct: 62  RISLTWSNKQPRG----FQRGA---RSYELQRGRISN------RKLGSKSQRGYKVGVKK 108

Query: 478 ---DGRGKSVDVSGGEERGYHQD---DYDGEEKDH--GGDYPDEGGGVVPNREDNVTWGE 323
              DG          EER Y+QD   DY GEE  H  G +   EGG + P+  DN  WG+
Sbjct: 109 LDRDGYRSDAVEMLDEERSYNQDNIKDY-GEENHHNAGENLSYEGGSIEPDAVDNDRWGQ 167

Query: 322 PTHDTPIDNGNG--NAIEFDRYEPYHGYDKKHDSEDNHAGYPRGYPAANS-QENIGRAQI 152
             H   + NGNG  N +EFDRYEPYHG D+ ++ ++    Y  G P   S QE  GR QI
Sbjct: 168 --HVGNLSNGNGLENGMEFDRYEPYHGEDRSNEDDNIQMTYSGGSPTLRSTQEKTGREQI 225

Query: 151 GEETSNHPNDSKFQQTCYRCGDTGHKMRNCPKEHSSWRNYNMLDVRQDN 5
                                  GHKMRNC + ++S + ++  D+++++
Sbjct: 226 -----------------------GHKMRNCLQGNASQKKFSRFDLKRND 251


>ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843176 [Brachypodium
           distachyon]
          Length = 628

 Score =  134 bits (336), Expect = 3e-29
 Identities = 93/275 (33%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
 Frame = -3

Query: 832 LYIGNLSEHVRGEELERVFRRFGHCNVRMKREGYGFVVFDFPSDAEKALRALKGRNICGE 653
           L+IG LS HVR   LE +F+ FG C V++K  GYGF VFD   DA +ALR L G+ +CGE
Sbjct: 3   LHIGRLSSHVRQGYLEHLFQAFGRCTVKLKN-GYGFAVFDSSDDAARALRELHGKPVCGE 61

Query: 652 PLTLMWSNKQPKSHFPKFARGGGGRSTYELHSARDSDRLGYGRRKTGFSGWRNHKIGVDG 473
            +T+ WS  QPK      +     R     H  R  D +G  R    FS   + K     
Sbjct: 62  RITVNWSKHQPKF---SLSSRRSSRFIESSHGRRSKDGVGSLR----FSEPADQKNHHTS 114

Query: 472 RGKSVDVSGGEERGYHQD----DYDGEEKDHGGDYPDEGGGVVPNREDNVTWGEPTHDTP 305
              S +  G  E+   Q+    +  G+++D G     +GG    N  ++  WG+      
Sbjct: 115 NATSCNPDGAAEKRSDQNAEGLEDVGDDEDPGEMKMGDGGTSDANAIEHDRWGDAGKGNH 174

Query: 304 IDNGNGNAIEFDRYEPYHGYDKKHDSEDNHAGYPRGYPAANSQENIGRAQIG---EETSN 134
            ++G+    +FDR+EPYHGY KK +                 +E IG+A  G   E   N
Sbjct: 175 GEDGD----DFDRFEPYHGYGKKEE-----------------KEKIGKADHGHFSEVWQN 213

Query: 133 HP--------NDSKFQQTCYRCGDTGHKMRNCPKE 53
           HP        +  K+  TCY CG  GH  RNC +E
Sbjct: 214 HPVEHFDLNHDKPKYCPTCYNCGSAGHVTRNCSEE 248


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