BLASTX nr result
ID: Glycyrrhiza24_contig00029749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00029749
(338 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi... 213 2e-53
ref|XP_003604235.1| Pentatricopeptide repeat-containing protein ... 207 5e-52
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi... 186 1e-45
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi... 186 1e-45
emb|CBI31326.3| unnamed protein product [Vitis vinifera] 181 5e-44
>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Glycine max]
Length = 682
Score = 213 bits (541), Expect = 2e-53
Identities = 99/112 (88%), Positives = 108/112 (96%)
Frame = +2
Query: 2 SLERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQG 181
S ERNVVCWTALMSGYA++G+LEQALRSTIWMQQEGFRPDVVT+ATVLP+CAQLRALEQG
Sbjct: 379 SKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQG 438
Query: 182 KQVHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
KQ+HAYALKHWFLPNVS+ +SLM MYS+CGVVEYS RLFDNMEQRNVISWTA
Sbjct: 439 KQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTA 490
Score = 78.6 bits (192), Expect = 5e-13
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = +2
Query: 8 ERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
ER+VV W A+++G+A + + L WM +EG +P+ V + V+P+ ++ A G++
Sbjct: 279 ERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQE 338
Query: 188 VHAYALK-HWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
HAY +K + V + +SL+ MY +CG + + R+F ++RNV+ WTA
Sbjct: 339 FHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTA 389
Score = 65.9 bits (159), Expect = 3e-09
Identities = 33/110 (30%), Positives = 59/110 (53%)
Frame = +2
Query: 8 ERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
+RNV+ WTA++ Y +G L +AL MQ RPD V + +L +C + + ++ GK+
Sbjct: 482 QRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKE 541
Query: 188 VHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
+H LK F ++ L+ MY G + + +F+ + + ++WTA
Sbjct: 542 IHGQILKRDFTSVHFVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTA 591
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Frame = +2
Query: 14 NVVCWTALMSGYASSGRLE--QALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
+V W AL+ G SG+ + L++ M+ G +V + + V+ A RA QG +
Sbjct: 178 SVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLK 237
Query: 188 VHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
H +K+ + N + TSL+ MY +CG V + R+F+ + +R+V+ W A
Sbjct: 238 THGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGA 287
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/97 (29%), Positives = 53/97 (54%)
Frame = +2
Query: 47 YASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQVHAYALKHWFLPN 226
+A +L++AL ++ Q G D T ++V+ C + ++L QG++VH + + N
Sbjct: 88 FARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENN 147
Query: 227 VSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
+ T L+ MY+ CG +E + +LFD + +V W A
Sbjct: 148 SFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNA 184
>ref|XP_003604235.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505290|gb|AES86432.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 688
Score = 207 bits (528), Expect = 5e-52
Identities = 99/112 (88%), Positives = 107/112 (95%)
Frame = +2
Query: 2 SLERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQG 181
S ERNVVCWTALMSGYAS GRLEQALR+ IWMQQEGFRPDVVTVATVLPICAQLRALEQG
Sbjct: 382 SPERNVVCWTALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQG 441
Query: 182 KQVHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
KQ+HAYALKHWFLPNVS+++SL+VMYS+CGVVEYS RLF +MEQRNVISWTA
Sbjct: 442 KQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTA 493
Score = 74.7 bits (182), Expect = 7e-12
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +2
Query: 8 ERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
ER+VV W ++SG++ + + L WM +EG P+ V + VLP+ ++ G++
Sbjct: 282 ERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQE 341
Query: 188 VHAYALK-HWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
VHA+ LK + V + ++L+ MY +CG + + +F + +RNV+ WTA
Sbjct: 342 VHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTA 392
Score = 73.2 bits (178), Expect = 2e-11
Identities = 36/110 (32%), Positives = 61/110 (55%)
Frame = +2
Query: 8 ERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
+RNV+ WTA++ Y +G L +AL MQ RPD V ++ +L +C +L+ L+ GK+
Sbjct: 485 QRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGKE 544
Query: 188 VHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
+H LK F ++ L+ MY G V+ + +F + + ++WTA
Sbjct: 545 IHGQILKRDFTSVHFVSAELINMYGALGDVDKANLVFSAVPVKGSMTWTA 594
Score = 55.5 bits (132), Expect = 4e-06
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 38 MSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQVHAYALKHWF 217
+ +A +L +AL ++ Q G + T ++++ C + +L GKQ+H + +
Sbjct: 83 IKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGL 142
Query: 218 LPNVSITTSLMVMYSRCGVVEYSARLFDNM-EQRNVISWTA 337
N + T L+ MY+ CG +E + +LFD + ++ +V W A
Sbjct: 143 EKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESSVYPWNA 183
>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 186 bits (473), Expect = 1e-45
Identities = 84/112 (75%), Positives = 102/112 (91%)
Frame = +2
Query: 2 SLERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQG 181
S+ERN +CWTALMSGYA +GRLEQA+RS IWMQQEGFRPD+VTVAT+LP+CAQLRAL G
Sbjct: 380 SMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPG 439
Query: 182 KQVHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
K++HAYA+K+ FLPNVSI +SLMVMYS+CGV++Y+ +LF+ MEQRNVI WTA
Sbjct: 440 KEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTA 491
Score = 77.0 bits (188), Expect = 1e-12
Identities = 35/110 (31%), Positives = 64/110 (58%)
Frame = +2
Query: 8 ERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
+RNV+ WTA++ Y + +A+ MQ RPD VT++ +L IC++ + L+ GK+
Sbjct: 483 QRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKE 542
Query: 188 VHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
+H LK F P ++ L+ +Y +CG V+ + +F+ + + ++WTA
Sbjct: 543 IHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTA 592
Score = 74.3 bits (181), Expect = 9e-12
Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Frame = +2
Query: 8 ERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
ER+VV W ++++G+A + +AL T M +G RP+ V + T+LP+ ++ A G++
Sbjct: 280 ERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQE 339
Query: 188 VHAYALK-HWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
VHAY +K + + I ++L+ MY +CG + +F +RN I WTA
Sbjct: 340 VHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTA 390
Score = 58.5 bits (140), Expect = 5e-07
Identities = 27/97 (27%), Positives = 53/97 (54%)
Frame = +2
Query: 47 YASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQVHAYALKHWFLPN 226
+A +L++AL ++ Q+G + T ++++ C + +++ KQ+HA+ + N
Sbjct: 89 FARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENN 148
Query: 227 VSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
I T L+ MY+ CG +E + +LFD ++V W A
Sbjct: 149 EFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNA 185
>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 186 bits (473), Expect = 1e-45
Identities = 84/112 (75%), Positives = 102/112 (91%)
Frame = +2
Query: 2 SLERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQG 181
S+ERN +CWTALMSGYA +GRLEQA+RS IWMQQEGFRPD+VTVAT+LP+CAQLRAL G
Sbjct: 380 SMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPG 439
Query: 182 KQVHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
K++HAYA+K+ FLPNVSI +SLMVMYS+CGV++Y+ +LF+ MEQRNVI WTA
Sbjct: 440 KEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTA 491
Score = 77.0 bits (188), Expect = 1e-12
Identities = 35/110 (31%), Positives = 64/110 (58%)
Frame = +2
Query: 8 ERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
+RNV+ WTA++ Y + +A+ MQ RPD VT++ +L IC++ + L+ GK+
Sbjct: 483 QRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKE 542
Query: 188 VHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
+H LK F P ++ L+ +Y +CG V+ + +F+ + + ++WTA
Sbjct: 543 IHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTA 592
Score = 74.3 bits (181), Expect = 9e-12
Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Frame = +2
Query: 8 ERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQ 187
ER+VV W ++++G+A + +AL T M +G RP+ V + T+LP+ ++ A G++
Sbjct: 280 ERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQE 339
Query: 188 VHAYALK-HWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
VHAY +K + + I ++L+ MY +CG + +F +RN I WTA
Sbjct: 340 VHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTA 390
Score = 58.5 bits (140), Expect = 5e-07
Identities = 27/97 (27%), Positives = 53/97 (54%)
Frame = +2
Query: 47 YASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQVHAYALKHWFLPN 226
+A +L++AL ++ Q+G + T ++++ C + +++ KQ+HA+ + N
Sbjct: 89 FARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENN 148
Query: 227 VSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
I T L+ MY+ CG +E + +LFD ++V W A
Sbjct: 149 EFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNA 185
>emb|CBI31326.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 181 bits (459), Expect = 5e-44
Identities = 85/112 (75%), Positives = 99/112 (88%)
Frame = +2
Query: 2 SLERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQG 181
S ERN V WTALMSGY S+GRL+QALRS WMQQEGFRPDVVTVATVLP+CA+LRAL QG
Sbjct: 207 STERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQG 266
Query: 182 KQVHAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
K++H+YA+K+ FLPNVSI TSLMVMYS+CG ++YS +LFD M+ RNVISWTA
Sbjct: 267 KEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTA 318
Score = 80.5 bits (197), Expect = 1e-13
Identities = 39/112 (34%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +2
Query: 5 LERNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGK 184
+ER+VV W A+++G+ + +AL WM++EG P+ V + T+LP+ ++ A + G+
Sbjct: 106 VERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGR 165
Query: 185 QVHAYALK-HWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
+VHAY +K + V I ++L+ MY +CG + ++F +RN +SWTA
Sbjct: 166 EVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTA 217
Score = 57.8 bits (138), Expect = 9e-07
Identities = 31/109 (28%), Positives = 51/109 (46%)
Frame = +2
Query: 11 RNVVCWTALMSGYASSGRLEQALRSTIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQV 190
RNV+ WTA++ Y RPD V +A +L IC +LR L+ GK++
Sbjct: 311 RNVISWTAMIDSY--------------------HRPDSVAMARILSICGELRVLKLGKEI 350
Query: 191 HAYALKHWFLPNVSITTSLMVMYSRCGVVEYSARLFDNMEQRNVISWTA 337
H LK F ++ ++ MY + G + + F + + ++WTA
Sbjct: 351 HGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTA 399