BLASTX nr result

ID: Glycyrrhiza24_contig00029742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029742
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...   273   1e-71
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   272   2e-71
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   272   2e-71
ref|XP_002313369.1| chromatin remodeling complex subunit [Populu...   270   9e-71
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   269   2e-70

>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223529287|gb|EEF31257.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1718

 Score =  273 bits (698), Expect = 1e-71
 Identities = 137/138 (99%), Positives = 138/138 (100%)
 Frame = -3

Query: 414  LHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC 235
            LHETKHRVLIFSQMVR+LDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC
Sbjct: 914  LHETKHRVLIFSQMVRLLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC 973

Query: 234  FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 55
            FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE
Sbjct: 974  FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 1033

Query: 54   EDILERAKKKMVLDHLVI 1
            EDILERAKKKMVLDHLVI
Sbjct: 1034 EDILERAKKKMVLDHLVI 1051


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  272 bits (695), Expect = 2e-71
 Identities = 136/138 (98%), Positives = 137/138 (99%)
 Frame = -3

Query: 414  LHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC 235
            LHETKHRVLIFSQMVRMLDIL EY+SLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC
Sbjct: 960  LHETKHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC 1019

Query: 234  FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 55
            FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE
Sbjct: 1020 FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 1079

Query: 54   EDILERAKKKMVLDHLVI 1
            EDILERAKKKMVLDHLVI
Sbjct: 1080 EDILERAKKKMVLDHLVI 1097


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  272 bits (695), Expect = 2e-71
 Identities = 136/138 (98%), Positives = 137/138 (99%)
 Frame = -3

Query: 414  LHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC 235
            LHETKHRVLIFSQMVRMLDIL EY+SLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC
Sbjct: 963  LHETKHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC 1022

Query: 234  FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 55
            FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE
Sbjct: 1023 FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 1082

Query: 54   EDILERAKKKMVLDHLVI 1
            EDILERAKKKMVLDHLVI
Sbjct: 1083 EDILERAKKKMVLDHLVI 1100


>ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222849777|gb|EEE87324.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1748

 Score =  270 bits (690), Expect = 9e-71
 Identities = 134/138 (97%), Positives = 138/138 (100%)
 Frame = -3

Query: 414  LHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC 235
            LHETKHRVLIFSQMVRMLDI+A+Y+SLRGFQFQRLDGSTKAELRQQAM+HFNAPGSDDFC
Sbjct: 936  LHETKHRVLIFSQMVRMLDIIAQYMSLRGFQFQRLDGSTKAELRQQAMEHFNAPGSDDFC 995

Query: 234  FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 55
            FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE
Sbjct: 996  FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 1055

Query: 54   EDILERAKKKMVLDHLVI 1
            EDILERAKKKMVLDHLVI
Sbjct: 1056 EDILERAKKKMVLDHLVI 1073


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355518633|gb|AET00257.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1739

 Score =  269 bits (688), Expect = 2e-70
 Identities = 134/138 (97%), Positives = 138/138 (100%)
 Frame = -3

Query: 414  LHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC 235
            LHETKHRVLIFSQMVRMLDILA+YLSLRGFQFQRLDGSTK+ELRQQAM+HFNAPGSDDFC
Sbjct: 945  LHETKHRVLIFSQMVRMLDILAQYLSLRGFQFQRLDGSTKSELRQQAMEHFNAPGSDDFC 1004

Query: 234  FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 55
            FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQ+VVNIYRFVTSKSVE
Sbjct: 1005 FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQDVVNIYRFVTSKSVE 1064

Query: 54   EDILERAKKKMVLDHLVI 1
            EDILERAKKKMVLDHLVI
Sbjct: 1065 EDILERAKKKMVLDHLVI 1082


Top