BLASTX nr result

ID: Glycyrrhiza24_contig00029741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029741
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   212   3e-53
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   212   3e-53
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   211   6e-53
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...   206   1e-51
gb|AAZ32872.1| putative chromodomain-helicase-DNA-binding protei...   202   2e-50

>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/108 (95%), Positives = 105/108 (97%)
 Frame = +1

Query: 1    QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGRIDNSK 180
            QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSG  DNSK
Sbjct: 880  QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSK 939

Query: 181  LERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLR 324
            LERIVFSSGKLVILDKLLV+LHETKHRVLIFSQMVRMLDIL EY+SLR
Sbjct: 940  LERIVFSSGKLVILDKLLVKLHETKHRVLIFSQMVRMLDILGEYMSLR 987


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/108 (95%), Positives = 105/108 (97%)
 Frame = +1

Query: 1    QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGRIDNSK 180
            QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSG  DNSK
Sbjct: 883  QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSK 942

Query: 181  LERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLR 324
            LERIVFSSGKLVILDKLLV+LHETKHRVLIFSQMVRMLDIL EY+SLR
Sbjct: 943  LERIVFSSGKLVILDKLLVKLHETKHRVLIFSQMVRMLDILGEYMSLR 990


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355518633|gb|AET00257.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1739

 Score =  211 bits (536), Expect = 6e-53
 Identities = 104/108 (96%), Positives = 105/108 (97%)
 Frame = +1

Query: 1    QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGRIDNSK 180
            QYYKWILERNF NLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSG  DNSK
Sbjct: 865  QYYKWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGGSDNSK 924

Query: 181  LERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLR 324
            LERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILA+YLSLR
Sbjct: 925  LERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAQYLSLR 972


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223529287|gb|EEF31257.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1718

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/108 (93%), Positives = 105/108 (97%)
 Frame = +1

Query: 1    QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGRIDNSK 180
            QYYKWILERNFH+LNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSG  D+SK
Sbjct: 834  QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGFNDSSK 893

Query: 181  LERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLR 324
            LERI+ SSGKLVILDKLLVRLHETKHRVLIFSQMVR+LDILAEYLSLR
Sbjct: 894  LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILAEYLSLR 941


>gb|AAZ32872.1| putative chromodomain-helicase-DNA-binding protein [Medicago
           sativa]
          Length = 171

 Score =  202 bits (514), Expect = 2e-50
 Identities = 99/108 (91%), Positives = 104/108 (96%)
 Frame = +1

Query: 1   QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGRIDNSK 180
           QYYKWILERNF +LNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDS   D+SK
Sbjct: 53  QYYKWILERNFRDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSESSDSSK 112

Query: 181 LERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLR 324
           LE+IVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILA+Y+SLR
Sbjct: 113 LEKIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAQYMSLR 160


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