BLASTX nr result

ID: Glycyrrhiza24_contig00029734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029734
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...    67   1e-09
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09

>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512235|gb|AES93858.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
 Frame = -3

Query: 205 VKFTYSRASPSIRWPHSKLSDIYPSTETQLPENNVLSAANTPLS--EETQKPGHAVISDE 32
           VKFTY+RASPSIRWP+SKL+D+YPST+T LP+N+V +     L   +ET K G     DE
Sbjct: 74  VKFTYNRASPSIRWPNSKLTDMYPSTDTLLPQNDVFAKKTRTLDTPDETHK-GEEQQEDE 132

Query: 31  TVEAQRTRSR 2
               +  R+R
Sbjct: 133 EETREIVRNR 142


>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Glycine max]
          Length = 1476

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = -3

Query: 205 VKFTYSRASPSIRWPHSKLSDIYPSTETQLPENNVLSAANTPL-SEETQKPGHAVISDET 29
           VKF Y+RASPSIRWPH KLS  YPST+   P+N++  +   P  S E + P   V  D+ 
Sbjct: 59  VKFIYTRASPSIRWPHLKLSQTYPSTQPHFPQNDIFPSKTPPSESPEEESPKPVVNDDDD 118

Query: 28  VEAQRTRSR 2
            EAQ    R
Sbjct: 119 DEAQEALGR 127


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