BLASTX nr result
ID: Glycyrrhiza24_contig00029685
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00029685
(289 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003603234.1| Pentatricopeptide repeat-containing protein ... 170 1e-40
ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40
ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containi... 165 4e-39
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 133 1e-29
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi... 133 1e-29
>ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 973
Score = 170 bits (430), Expect = 1e-40
Identities = 82/94 (87%), Positives = 88/94 (93%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
L+QGKQIHAVVIKMRF DLFVISG+LDMYLKCGEM+SARKVF++I PDDVAWTT+ISG
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
CVENGEEE ALFTYHQMRLAGVQ DEYTFATLVK
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVK 609
Score = 74.3 bits (181), Expect = 1e-11
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
LEQGKQIHA ++K+ D FV++ ++DMY KCG +E A +F + W MI G
Sbjct: 617 LEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVG 676
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTF 272
++G E AL +++M+ GV D TF
Sbjct: 677 LAQHGNAEEALNFFNEMKSRGVTPDRVTF 705
Score = 70.1 bits (170), Expect = 2e-10
Identities = 31/94 (32%), Positives = 59/94 (62%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
LE GKQIH V++ +D + V + ++MY+K G + AR++F ++ D ++W T+ISG
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
C +G EE +L + + +G+ D++T ++++
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLPDQFTITSVLR 406
>ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 169 bits (429), Expect = 2e-40
Identities = 82/95 (86%), Positives = 88/95 (92%)
Frame = +3
Query: 3 GLEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMIS 182
GL+QGKQIHAVV+K F+LDLFV SGVLDMYLKCGEMESAR+VFSEI PDDVAWTTMIS
Sbjct: 1153 GLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMIS 1212
Query: 183 GCVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
GCVENG+EEHALFTYHQMRL+ VQ DEYTFATLVK
Sbjct: 1213 GCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVK 1247
Score = 73.2 bits (178), Expect = 2e-11
Identities = 35/89 (39%), Positives = 51/89 (57%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
LEQG+QIHA ++K+ D FV++ ++DMY KCG +E AR +F +W MI G
Sbjct: 1255 LEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVG 1314
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTF 272
++G + AL + M+ GV D TF
Sbjct: 1315 LAQHGNAKEALQFFKYMKSRGVMPDRVTF 1343
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/94 (34%), Positives = 58/94 (61%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
LE GKQIH +V++ D + V + +++MY+K G + AR VF ++ D ++W TMISG
Sbjct: 951 LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG 1010
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
C +G EE ++ + + + D++T A++++
Sbjct: 1011 CTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLR 1044
>ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 165 bits (417), Expect = 4e-39
Identities = 79/95 (83%), Positives = 87/95 (91%)
Frame = +3
Query: 3 GLEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMIS 182
GL+QGKQI AVV+K F+LDLFVISGVLDMYLKCGEMESAR++F+EI PDDVAWTTMIS
Sbjct: 1124 GLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMIS 1183
Query: 183 GCVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
GCVENG+EEHALFTYH MRL+ VQ DEYTFATLVK
Sbjct: 1184 GCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVK 1218
Score = 75.1 bits (183), Expect = 6e-12
Identities = 36/89 (40%), Positives = 51/89 (57%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
LEQG+QIHA +K+ D FV++ ++DMY KCG +E AR +F +W MI G
Sbjct: 1226 LEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVG 1285
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTF 272
++G E AL + +M+ GV D TF
Sbjct: 1286 LAQHGNAEEALQFFEEMKSRGVTPDRVTF 1314
Score = 67.4 bits (163), Expect = 1e-09
Identities = 34/94 (36%), Positives = 59/94 (62%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
LE GKQIH +V++ D + V + +++MY+K G + AR VF ++ D V+W TMISG
Sbjct: 922 LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
C +G EE ++ + + G+ D++T A++++
Sbjct: 982 CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLR 1015
Score = 57.8 bits (138), Expect = 9e-07
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = +3
Query: 18 KQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISGCVEN 197
+ +H +K+ D+FV ++++Y K G + AR +F + L D V W M+ V+
Sbjct: 747 ESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDT 806
Query: 198 GEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
G E AL + + G++ D+ T TL +
Sbjct: 807 GLEYEALLLFSEFNRTGLRPDDVTLCTLAR 836
>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 133 bits (335), Expect = 1e-29
Identities = 62/94 (65%), Positives = 79/94 (84%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
L+QGKQI A IK+ F+ DL+V SGVLDMY+KCG+M +A ++F EI+ PD+VAWTTMISG
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
+ENG+E+HAL YH MR++GVQ DEYTFATL+K
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIK 1208
Score = 78.6 bits (192), Expect = 5e-13
Identities = 37/89 (41%), Positives = 57/89 (64%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
LEQGKQIHA V+K+ + LD FV + ++DMY KCG ++ A +VF ++ + V W M+ G
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLG 1275
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTF 272
++G + AL + M+ G+Q D+ TF
Sbjct: 1276 LAQHGHVDEALNLFRTMQSNGIQPDKVTF 1304
Score = 62.4 bits (150), Expect = 4e-08
Identities = 32/94 (34%), Positives = 56/94 (59%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
L+ G+QIHA+VIK F + V + +++MY K G + +A K F D ++W TMIS
Sbjct: 910 LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
+N E A+ T+ + G++ D++T A++++
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLR 1003
>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 133 bits (335), Expect = 1e-29
Identities = 62/94 (65%), Positives = 79/94 (84%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
L+QGKQI A IK+ F+ DL+V SGVLDMY+KCG+M +A ++F EI+ PD+VAWTTMISG
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
+ENG+E+HAL YH MR++GVQ DEYTFATL+K
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIK 1208
Score = 78.6 bits (192), Expect = 5e-13
Identities = 37/89 (41%), Positives = 57/89 (64%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
LEQGKQIHA V+K+ + LD FV + ++DMY KCG ++ A +VF ++ + V W M+ G
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLG 1275
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTF 272
++G + AL + M+ G+Q D+ TF
Sbjct: 1276 LAQHGHVDEALNLFRTMQSNGIQPDKVTF 1304
Score = 62.4 bits (150), Expect = 4e-08
Identities = 32/94 (34%), Positives = 56/94 (59%)
Frame = +3
Query: 6 LEQGKQIHAVVIKMRFDLDLFVISGVLDMYLKCGEMESARKVFSEIALPDDVAWTTMISG 185
L+ G+QIHA+VIK F + V + +++MY K G + +A K F D ++W TMIS
Sbjct: 910 LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969
Query: 186 CVENGEEEHALFTYHQMRLAGVQSDEYTFATLVK 287
+N E A+ T+ + G++ D++T A++++
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLR 1003