BLASTX nr result

ID: Glycyrrhiza24_contig00029650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029650
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    45   2e-10
emb|CAN66029.1| hypothetical protein VITISV_019647 [Vitis vinifera]    44   2e-09
emb|CAN69430.1| hypothetical protein VITISV_024658 [Vitis vinifera]    44   2e-09
emb|CAN77987.1| hypothetical protein VITISV_015002 [Vitis vinifera]    44   3e-09
emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]    44   5e-09

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 45.4 bits (106), Expect(2) = 2e-10
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 198 IWKAIATTWTDIRQHEAWTIGNETMVDFWNDRWLDHFTPL 317
           +WKAI   W D ++H  W IG+    +FW D+W+ + T L
Sbjct: 338 LWKAIVGIWDDFKRHVIWQIGDGRSTNFWLDKWISNNTSL 377



 Score = 44.3 bits (103), Expect(2) = 2e-10
 Identities = 21/45 (46%), Positives = 26/45 (57%)
 Frame = +2

Query: 14  LPKEHGGLAIRNLPIMNRACVMKLTWQLRQNNQSLWCRVLRGK*G 148
           LPK +GGL  +    MN A +MK+ W L +    LWCRVL  K G
Sbjct: 276 LPKMNGGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYG 320


>emb|CAN66029.1| hypothetical protein VITISV_019647 [Vitis vinifera]
          Length = 1457

 Score = 44.3 bits (103), Expect(2) = 2e-09
 Identities = 21/54 (38%), Positives = 31/54 (57%)
 Frame = +2

Query: 20   KEHGGLAIRNLPIMNRACVMKLTWQLRQNNQSLWCRVLRGK*GMMGMLIRWWCS 181
            K++GGL IRNL I N+A + K  W+    N+SLW +++  K  +       WCS
Sbjct: 1044 KKNGGLGIRNLAIFNKALLGKWLWRFANENESLWKQIISSKYDLQD---GGWCS 1094



 Score = 42.4 bits (98), Expect(2) = 2e-09
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = +3

Query: 198  IWKAIATTWTDIRQHEAWTIGNETMVDFWNDRWLDH------FTPLRHMVDNIPAHLAAI 359
            +WKAI   W   R H  + +G+ T V FW D W ++      F  L ++  N  + +A  
Sbjct: 1105 VWKAIRNGWESFRSHSHFFVGDGTRVKFWKDLWCENQSLEEAFPTLFNLSVNKDSWVAEA 1164

Query: 360  EEGEGLG 380
             E +G+G
Sbjct: 1165 WEEDGVG 1171


>emb|CAN69430.1| hypothetical protein VITISV_024658 [Vitis vinifera]
          Length = 1998

 Score = 43.5 bits (101), Expect(2) = 2e-09
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 198  IWKAIATTWTDIRQHEAWTIGNETMVDFWNDRWLDH 305
            +WKAI   W D R H  + +G+ T V FW D W ++
Sbjct: 1699 VWKAIRNGWEDFRSHSRFLVGDGTRVKFWKDLWCEN 1734



 Score = 42.7 bits (99), Expect(2) = 2e-09
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +2

Query: 20   KEHGGLAIRNLPIMNRACVMKLTWQLRQNNQSLWCRVLRGK*GMMGMLIRWWCS 181
            K+ GGL IRNL I N+A + K  W+    N SLW +++  K  +       WCS
Sbjct: 1638 KKDGGLGIRNLXIFNKALLGKWLWRFANENDSLWKQIISSKYDLQD---GGWCS 1688


>emb|CAN77987.1| hypothetical protein VITISV_015002 [Vitis vinifera]
          Length = 839

 Score = 43.5 bits (101), Expect(2) = 3e-09
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 198 IWKAIATTWTDIRQHEAWTIGNETMVDFWNDRWLDH 305
           +WKAI   W D R H  + +G+ T V FW D W ++
Sbjct: 456 VWKAIRNGWEDFRSHSRFLVGDGTRVKFWKDLWCEN 491



 Score = 42.7 bits (99), Expect(2) = 3e-09
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +2

Query: 20  KEHGGLAIRNLPIMNRACVMKLTWQLRQNNQSLWCRVLRGK*GMMGMLIRWWCS 181
           K+ GGL IRNL I N+A + K  W+    N SLW +++  K  +       WCS
Sbjct: 395 KKDGGLGIRNLAIFNKALLGKWLWRFANENDSLWKQIISSKYDLQD---GGWCS 445


>emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]
          Length = 1296

 Score = 43.5 bits (101), Expect(2) = 5e-09
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +2

Query: 20   KEHGGLAIRNLPIMNRACVMKLTWQLRQNNQSLWCRVLRGK*GMMGMLIRWWCS 181
            K+ GGL IRNL I N+A + K  W+    N+SLW +++  K  +       WCS
Sbjct: 936  KKDGGLGIRNLAIFNKALLGKWLWRFANENESLWKQIISSKYDLQD---GGWCS 986



 Score = 41.6 bits (96), Expect(2) = 5e-09
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 198  IWKAIATTWTDIRQHEAWTIGNETMVDFWNDRWLDH 305
            +WKAI   W + R H  + +G+ T V FW D W ++
Sbjct: 997  VWKAIRNGWENFRSHSRFLVGDGTRVKFWKDLWCEN 1032


Top