BLASTX nr result

ID: Glycyrrhiza24_contig00029643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029643
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534978.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   170   1e-40
ref|XP_002516196.1| Pectinesterase-2 precursor, putative [Ricinu...   125   3e-27
ref|XP_002326315.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_002277293.2| PREDICTED: probable pectinesterase/pectinest...   108   4e-22
ref|XP_002874018.1| pectinesterase family protein [Arabidopsis l...    78   9e-13

>ref|XP_003534978.1| PREDICTED: LOW QUALITY PROTEIN: probable
           pectinesterase/pectinesterase inhibitor 54-like [Glycine
           max]
          Length = 514

 Score =  170 bits (431), Expect = 1e-40
 Identities = 86/122 (70%), Positives = 102/122 (83%), Gaps = 2/122 (1%)
 Frame = +1

Query: 103 DHAHSECNLTRYPNLCVETLMGLGSGDDN-NNIIVALVNKTIYETNLLTSYFAELKTRDT 279
           +HAH+ECNLTRYPNLC ETLM LG G+ N +N I ALVNKTI+ET+L +SYFAE KT + 
Sbjct: 11  EHAHNECNLTRYPNLCAETLMELGLGNQNVDNNIEALVNKTIFETSLPSSYFAEFKTGEA 70

Query: 280 QQANSV-ADYCDDQMGMSLKRLDQSLKALKWPRGNKNDIQTWLSASLTFQQTCKDYADAH 456
           Q A+SV ADYC++ M MSLKRLDQSL+ALK P+ N NDIQTWLSASLTFQQ+CKD+  AH
Sbjct: 71  QPAHSVVADYCEELMSMSLKRLDQSLRALKSPKRNTNDIQTWLSASLTFQQSCKDHVHAH 130

Query: 457 SS 462
           +S
Sbjct: 131 TS 132


>ref|XP_002516196.1| Pectinesterase-2 precursor, putative [Ricinus communis]
           gi|223544682|gb|EEF46198.1| Pectinesterase-2 precursor,
           putative [Ricinus communis]
          Length = 527

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/138 (51%), Positives = 93/138 (67%), Gaps = 7/138 (5%)
 Frame = +1

Query: 61  FFMLGCALARVSTSDHAH--SECNLTRYPNLCVETLMGLGSGDDNNNIIVALVNKTIYET 234
           F++LG ALA  S  ++     EC+ TRYP+LC++TL GL   DD+ +I+ ALVNK+I ET
Sbjct: 7   FWLLGSALAASSMDENLQIQEECSFTRYPSLCLQTLRGLR--DDSVHIVSALVNKSISET 64

Query: 235 NLLTSYFAELKTR----DTQQANSVADYCDDQMGMSLKRLDQSLKALKW-PRGNKNDIQT 399
            L  S+F  L ++    + Q   S  DYC++ M MSLK LD+SL ALK  P  NKNDIQT
Sbjct: 65  KLPVSFFTSLTSQLGIQEAQYTQSTTDYCENLMKMSLKLLDKSLLALKQSPEKNKNDIQT 124

Query: 400 WLSASLTFQQTCKDYADA 453
           WLSA+LT+QQ CKD  D+
Sbjct: 125 WLSAALTYQQACKDSVDS 142


>ref|XP_002326315.1| predicted protein [Populus trichocarpa] gi|222833508|gb|EEE71985.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  122 bits (305), Expect = 4e-26
 Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 13/155 (8%)
 Frame = +1

Query: 49  VVITFFMLGCALARVSTSDHA--------HSECNLTRYPNLCVETLMGLGSGDDNNNIIV 204
           V++  ++LG  L   S S  A         ++C+ TRYP LC+++L      D   +I+ 
Sbjct: 5   VLVVLWLLGYTLGGASMSWAATHSFQMQVQTQCSYTRYPGLCLQSLKEFQ--DHPLDIMT 62

Query: 205 ALVNKTIYETNLLTSYF----AELKTRDTQQANSVADYCDDQMGMSLKRLDQSLKALK-W 369
           ALVNKTI ET L  SYF    + L+ ++ ++  SV DYC + M MSLKRLDQSL ALK  
Sbjct: 63  ALVNKTISETRLPNSYFETLSSHLEAQEAERVLSVTDYCKNLMSMSLKRLDQSLLALKDS 122

Query: 370 PRGNKNDIQTWLSASLTFQQTCKDYADAHSSANDL 474
           PR NK+DIQTWLSA+LTFQQ CKD  D+ S + DL
Sbjct: 123 PRKNKHDIQTWLSAALTFQQACKDSTDSLSLSGDL 157


>ref|XP_002277293.2| PREDICTED: probable pectinesterase/pectinesterase inhibitor 54-like
           [Vitis vinifera]
          Length = 506

 Score =  108 bits (270), Expect = 4e-22
 Identities = 65/116 (56%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
 Frame = +1

Query: 115 SECNLTRYPNLCVETLMGLGSGDDNNNIIVALVNKTIYETNLLTSYFA----ELKTRDTQ 282
           SEC  T YP LCV+TL+GLG      +I   LVNK + ET L TS  A    +L T +  
Sbjct: 11  SECGFTTYPKLCVQTLLGLGHS--KVDIPFVLVNKILSETRLPTSNIAKFSYQLATPEAH 68

Query: 283 QANSVADYCDDQMGMSLKRLDQSLKALKWP-RGNKNDIQTWLSASLTFQQTCKDYA 447
            A+ V D CD  M MSLK+L+QSL ALK   R NK+DIQTWLSA+LTFQQTCKD A
Sbjct: 69  SAHLVRDSCDMLMSMSLKQLNQSLLALKESARKNKHDIQTWLSAALTFQQTCKDLA 124


>ref|XP_002874018.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319855|gb|EFH50277.1| pectinesterase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 527

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 14/121 (11%)
 Frame = +1

Query: 121 CNLTRYPNLCVETLMGLGSGD-DNNNIIVALVNKTIYETNLL---------TSYFAELKT 270
           C+ T+Y +LCV+ L     G  D  + +  LVNKTI ++NLL         +S    L+ 
Sbjct: 39  CSSTKYTSLCVQNLREFRHGSLDGLDFVSVLVNKTISDSNLLIPPLSSSMGSSELVSLED 98

Query: 271 RD-TQQANSVADYCDDQMGMSLKRLDQSLKALKWP---RGNKNDIQTWLSASLTFQQTCK 438
              T  + SV+D C+  M MS +RL Q+++AL      R  K+D+QTWLSA++TFQQ CK
Sbjct: 99  STYTLPSPSVSDSCERLMKMSTRRLRQAMEALNGSSRKRHTKHDVQTWLSAAITFQQACK 158

Query: 439 D 441
           D
Sbjct: 159 D 159


Top