BLASTX nr result

ID: Glycyrrhiza24_contig00029639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029639
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519974.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   2e-12
ref|XP_003637193.1| ATP-dependent RNA helicase [Medicago truncat...    70   2e-10

>ref|XP_003519974.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine
           max]
          Length = 373

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 12/83 (14%)
 Frame = -3

Query: 217 QRDSLVLEEFRQRKLKGS-----------SSSKDSNLDT-TEEVVQRGLNNESECEPTPT 74
           QRDSL+ E+F+QRKLKGS           S+S   + D  TE+VVQ+G+ NE++    PT
Sbjct: 61  QRDSLIFEQFKQRKLKGSPKDSKGTPQVCSTSVPLSSDADTEKVVQKGVRNEND----PT 116

Query: 73  MVVANFKELGVSEELAEVMEGIG 5
           +VV  FKELGVSEEL EVMEGIG
Sbjct: 117 LVVRGFKELGVSEELVEVMEGIG 139


>ref|XP_003637193.1| ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503128|gb|AES84331.1| ATP-dependent RNA helicase
           [Medicago truncatula]
          Length = 410

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
 Frame = -3

Query: 217 QRDSLVLEEFRQRKLKGSSSSK-DSNLDTT--EEVVQRGLNNESECEPTPTMVVANFKEL 47
           +RDSL+L++F+QRKLKGSS+S  +S+ D T  E+++Q GL N        TMVV  FKEL
Sbjct: 44  ERDSLILQQFKQRKLKGSSNSVLNSSFDDTNDEKMIQNGLKNG-------TMVVGGFKEL 96

Query: 46  GVSEELAEVMEGIG 5
           G+S+EL EVME IG
Sbjct: 97  GMSDELIEVMEEIG 110


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