BLASTX nr result

ID: Glycyrrhiza24_contig00029624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029624
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like...   160   1e-37
gb|AFK48908.1| unknown [Lotus japonicus]                              157   7e-37
ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycin...   157   9e-37
ref|XP_003612231.1| RING finger protein [Medicago truncatula] gi...   154   7e-36
ref|XP_002531146.1| nucleic acid binding protein, putative [Rici...   109   3e-22

>ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like [Glycine max]
          Length = 133

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/115 (67%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = -3

Query: 377 DAPLP-YILVPKKKTNKQSSESATASNLMEKSTIESGAFCCVCLSRLNNKDEIRVLPCLH 201
           DAPLP Y+L    ++NKQ S  +T+++    S     ++CCVCLSRL  KDEIRVLPC H
Sbjct: 24  DAPLPSYMLSSHIESNKQQSSESTSASA---SNFNEDSWCCVCLSRLKAKDEIRVLPCSH 80

Query: 200 EFHKVCVNRWLKGHHKTCPLCRFSIGGGAEEKSHRAEMFTEEMLIWFSSFHITGM 36
           +FHK CVNRWLKG HKTCPLCRFS+  GAEEKSHRAEMFTEEMLIWFSSFH+ GM
Sbjct: 81  KFHKSCVNRWLKGRHKTCPLCRFSM--GAEEKSHRAEMFTEEMLIWFSSFHVAGM 133


>gb|AFK48908.1| unknown [Lotus japonicus]
          Length = 113

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/91 (80%), Positives = 80/91 (87%)
 Frame = -3

Query: 308 ASNLMEKSTIESGAFCCVCLSRLNNKDEIRVLPCLHEFHKVCVNRWLKGHHKTCPLCRFS 129
           ASN MEKS      +CCVCLSRL ++DEIRVLPCLHEFHK+CVNRWLKGHHKTCPLCRFS
Sbjct: 26  ASNFMEKSG--GHGWCCVCLSRLKDRDEIRVLPCLHEFHKICVNRWLKGHHKTCPLCRFS 83

Query: 128 IGGGAEEKSHRAEMFTEEMLIWFSSFHITGM 36
           + G AEEKSHRAEMFT+EM+IWFSSFHI GM
Sbjct: 84  M-GAAEEKSHRAEMFTDEMVIWFSSFHIAGM 113


>ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycine max]
           gi|255632902|gb|ACU16805.1| unknown [Glycine max]
          Length = 101

 Score =  157 bits (397), Expect = 9e-37
 Identities = 75/103 (72%), Positives = 84/103 (81%)
 Frame = -3

Query: 344 KKTNKQSSESATASNLMEKSTIESGAFCCVCLSRLNNKDEIRVLPCLHEFHKVCVNRWLK 165
           +   +QSSESA+ASN  E S      +CCVCLSRL  KDEIRVLPC H+FHK+CVN+WLK
Sbjct: 7   QNNKQQSSESASASNFNEDS------WCCVCLSRLKAKDEIRVLPCSHKFHKICVNKWLK 60

Query: 164 GHHKTCPLCRFSIGGGAEEKSHRAEMFTEEMLIWFSSFHITGM 36
           G HKTCPLCRFS+  GAEEKSHRAEMFTEEMLIWFSSFH+ GM
Sbjct: 61  GRHKTCPLCRFSM--GAEEKSHRAEMFTEEMLIWFSSFHVAGM 101


>ref|XP_003612231.1| RING finger protein [Medicago truncatula]
           gi|355513566|gb|AES95189.1| RING finger protein
           [Medicago truncatula]
          Length = 142

 Score =  154 bits (389), Expect = 7e-36
 Identities = 79/115 (68%), Positives = 89/115 (77%), Gaps = 4/115 (3%)
 Frame = -3

Query: 377 DAPLPYIL---VPKKKTNKQSSESATASNLMEKSTIESGAFCCVCLSRLNNKDEIRVLPC 207
           DA LPYI+   +   KTN+QSSES++ +N +          CCVCLS LNNKDEIRVLPC
Sbjct: 24  DAILPYIVATSIVPNKTNQQSSESSSTTNDV--------GLCCVCLSMLNNKDEIRVLPC 75

Query: 206 LHEFHKVCVNRWLKGHHKTCPLCRFSIGGGAEEKS-HRAEMFTEEMLIWFSSFHI 45
            HEFHKVCV+ WLKGHHKTCPLCRFS+  G EEKS HRAEMF+EEMLIWFSSFHI
Sbjct: 76  SHEFHKVCVDSWLKGHHKTCPLCRFSM--GVEEKSHHRAEMFSEEMLIWFSSFHI 128


>ref|XP_002531146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529259|gb|EEF31231.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 137

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
 Frame = -3

Query: 335 NKQSSESATASNLMEKSTIES-GAFCCVCLSRLNNKDEIRVLPCLHEFHKVCVNRWLKGH 159
           N +  E  +        T E+ G FCCVCLSRL   + +RVLPC+H FH+VC++RW    
Sbjct: 38  NSKDGELTSPGGSCSAETAEAEGEFCCVCLSRLKGGENMRVLPCMHRFHRVCIDRWFNVC 97

Query: 158 HKTCPLCRFSIGGGAEEKSH-RAEMFTEEMLIWFSSFHITG 39
            KTCP+CRF++  G EE+++ R E  TEEM+IWFSSFH+ G
Sbjct: 98  RKTCPVCRFAM--GQEERTYKREEQLTEEMVIWFSSFHVAG 136


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