BLASTX nr result

ID: Glycyrrhiza24_contig00029610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029610
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]              150   1e-34
ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]              149   2e-34
emb|CBI27138.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra...   112   3e-23
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ...   110   9e-23

>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4760

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/94 (80%), Positives = 83/94 (88%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3    LIDSSAYPAISLSLKAYGDQIYSFWPRSL-RHVPNDQLGDH-NNTSSSSVAVLKADWECL 176
            +IDSSA  AISLSLKAYGD+IYSFWPRS  RHV +DQLG+H NN  S++  VLKADWECL
Sbjct: 3219 IIDSSACSAISLSLKAYGDKIYSFWPRSCERHVLSDQLGNHDNNPPSTTAVVLKADWECL 3278

Query: 177  KERVIHPFYSRIVDLPVWQLYSGNLVKAEEGMFL 278
            K+ VIHPFYSRIVDLPVWQLYSGNLVKAEEGMFL
Sbjct: 3279 KDWVIHPFYSRIVDLPVWQLYSGNLVKAEEGMFL 3312


>ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4756

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/94 (79%), Positives = 82/94 (87%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3    LIDSSAYPAISLSLKAYGDQIYSFWPRSL-RHVPNDQLGDH-NNTSSSSVAVLKADWECL 176
            +IDSS   AISLSLKAYGD+IYSFWPRS  RHV +DQLG+H NN  S++  VLKADWECL
Sbjct: 3218 IIDSSVCSAISLSLKAYGDKIYSFWPRSCERHVLSDQLGNHDNNHPSTTAVVLKADWECL 3277

Query: 177  KERVIHPFYSRIVDLPVWQLYSGNLVKAEEGMFL 278
            K+RVIHPFYSRIVDLPVWQLYSG LVKAEEGMFL
Sbjct: 3278 KDRVIHPFYSRIVDLPVWQLYSGTLVKAEEGMFL 3311


>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/91 (63%), Positives = 71/91 (78%)
 Frame = +3

Query: 6    IDSSAYPAISLSLKAYGDQIYSFWPRSLRHVPNDQLGDHNNTSSSSVAVLKADWECLKER 185
            I+ +    I+L+LKAYGD+IYSFWPRS  +   ++  D +N  S++V  LKADWECL E 
Sbjct: 2579 IEPTVGHTINLALKAYGDRIYSFWPRSTGNSLVNEPSDGSNLISTNV--LKADWECLIEH 2636

Query: 186  VIHPFYSRIVDLPVWQLYSGNLVKAEEGMFL 278
            VI PFY+R+VDLPVWQLYSGNLVKAEEGMFL
Sbjct: 2637 VIRPFYARLVDLPVWQLYSGNLVKAEEGMFL 2667


>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317873|gb|EFH48295.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 4711

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/91 (59%), Positives = 67/91 (73%)
 Frame = +3

Query: 6    IDSSAYPAISLSLKAYGDQIYSFWPRSLRHVPNDQLGDHNNTSSSSVAVLKADWECLKER 185
            I+SS    ++LSLKAYG Q+YSFWPRS +H    Q     +  + +  VLK +WECL E+
Sbjct: 3201 IESSTARQLALSLKAYGHQLYSFWPRSNQHALRSQ-----HDGAIATEVLKPEWECLVEQ 3255

Query: 186  VIHPFYSRIVDLPVWQLYSGNLVKAEEGMFL 278
            VI PFY+R+ DLP+WQLYSGNLVKAEEGMFL
Sbjct: 3256 VIRPFYARVADLPLWQLYSGNLVKAEEGMFL 3286


>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
          Length = 3586

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +3

Query: 6    IDSSAYPAISLSLKAYGDQIYSFWPRSLRHVPNDQLGDHNNTSSSSV-AVLKADWECLKE 182
            ++S+   +ISLSLKAYG+Q+YSFWPRS          +  N S+S +   LKADWECL E
Sbjct: 3228 LESNVSHSISLSLKAYGNQVYSFWPRS----------EPANFSNSDLDRGLKADWECLVE 3277

Query: 183  RVIHPFYSRIVDLPVWQLYSGNLVKAEEGMFL 278
            +VI PFY+R +DLPVWQLYSGNLVKAEEGMFL
Sbjct: 3278 QVIRPFYTRAIDLPVWQLYSGNLVKAEEGMFL 3309


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