BLASTX nr result

ID: Glycyrrhiza24_contig00029594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029594
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626147.1| Pectinesterase [Medicago truncatula] gi|3555...    75   6e-12
gb|AAV91509.1| VGD1-like protein 1 [Arabidopsis thaliana]              59   3e-07
gb|AAC27719.1| flower-specific pectin methylesterase precursor [...    59   3e-07
gb|AAN15509.1| putative pectinesterase [Arabidopsis thaliana]          59   3e-07
ref|NP_182226.1| pectinesterase 4 [Arabidopsis thaliana] gi|6121...    59   3e-07

>ref|XP_003626147.1| Pectinesterase [Medicago truncatula] gi|355501162|gb|AES82365.1|
           Pectinesterase [Medicago truncatula]
          Length = 560

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 47/106 (44%), Positives = 57/106 (53%)
 Frame = +2

Query: 2   SYQILGYSMKIPILRARITLAIVNNFSDQDSTNRALATASQHDAEIPATPISGQQQHKLM 181
           SY+IL YS+KIPIL  RITLAIV NF ++           Q         ++ +  HKL+
Sbjct: 182 SYEILAYSLKIPILLTRITLAIVYNFVERPKIEVQQLDGFQR--------LNLRAAHKLI 233

Query: 182 EVRRDGGGRGQQPNAVVAKDGSGQFRTIGESFSACPKNNKGQCVIY 319
           EV        Q    VVA+DGSGQF TI ES + C KN    CVIY
Sbjct: 234 EV--------QHTRIVVAQDGSGQFSTITESLNYCAKNRNNSCVIY 271


>gb|AAV91509.1| VGD1-like protein 1 [Arabidopsis thaliana]
          Length = 588

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +2

Query: 197 GGGRGQQPNAVVAKDGSGQFRTIGESFSACPKNNKGQCVIY 319
           GGG   + N VVAKDGSGQF+T+ ++  ACP+NN+G+C+IY
Sbjct: 268 GGGARVRANFVVAKDGSGQFKTVQQAVDACPENNRGRCIIY 308


>gb|AAC27719.1| flower-specific pectin methylesterase precursor [Arabidopsis
           thaliana]
          Length = 586

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +2

Query: 197 GGGRGQQPNAVVAKDGSGQFRTIGESFSACPKNNKGQCVIY 319
           GGG   + N VVAKDGSGQF+T+ ++  ACP+NN+G+C+IY
Sbjct: 268 GGGARVRTNFVVAKDGSGQFKTVQQAVDACPENNRGRCIIY 308


>gb|AAN15509.1| putative pectinesterase [Arabidopsis thaliana]
          Length = 470

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +2

Query: 197 GGGRGQQPNAVVAKDGSGQFRTIGESFSACPKNNKGQCVIY 319
           GGG   + N VVAKDGSGQF+T+ ++  ACP+NN+G+C+IY
Sbjct: 268 GGGARVRTNFVVAKDGSGQFKTVQQAVDACPENNRGRCIIY 308


>ref|NP_182226.1| pectinesterase 4 [Arabidopsis thaliana]
           gi|61213847|sp|O80722.1|PME4_ARATH RecName:
           Full=Pectinesterase 4; Short=PE 4; AltName: Full=Pectin
           methylesterase 18; Short=AtPME18; AltName: Full=Pectin
           methylesterase 4; Short=AtPME4; AltName:
           Full=VANGUARD1-like protein 1; Short=VGD1-like protein
           1; Flags: Precursor gi|3522959|gb|AAC34241.1| putative
           pectinesterase [Arabidopsis thaliana]
           gi|15450765|gb|AAK96654.1| putative pectinesterase
           [Arabidopsis thaliana] gi|330255696|gb|AEC10790.1|
           pectinesterase 4 [Arabidopsis thaliana]
          Length = 588

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +2

Query: 197 GGGRGQQPNAVVAKDGSGQFRTIGESFSACPKNNKGQCVIY 319
           GGG   + N VVAKDGSGQF+T+ ++  ACP+NN+G+C+IY
Sbjct: 268 GGGARVRTNFVVAKDGSGQFKTVQQAVDACPENNRGRCIIY 308


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