BLASTX nr result

ID: Glycyrrhiza24_contig00029565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029565
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein ...    83   3e-14
ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein ...    82   4e-14
ref|XP_003532039.1| PREDICTED: paired amphipathic helix protein ...    76   3e-12
ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein ...    75   4e-12
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...    70   1e-10

>ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1407

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/46 (86%), Positives = 44/46 (95%)
 Frame = +3

Query: 183 MKRSRDDVFMSSSQLKRPMMSSRGEASGQPQMMNGGAQKLTTNDAL 320
           MKRSRD+VF S SQLKRP++SSRGEASGQPQ+MNGGAQKLTTNDAL
Sbjct: 1   MKRSRDEVFTSCSQLKRPVVSSRGEASGQPQIMNGGAQKLTTNDAL 46


>ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1414

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = +3

Query: 183 MKRSRDDVFMSSSQLKRPMMSSRGEASGQPQMMNGGAQKLTTNDAL 320
           MKRSRD+V  S SQLKRP++SSRGEASGQPQMMNGGAQKLTTNDAL
Sbjct: 1   MKRSRDEVLTSCSQLKRPVLSSRGEASGQPQMMNGGAQKLTTNDAL 46


>ref|XP_003532039.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like
           [Glycine max]
          Length = 1404

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +3

Query: 183 MKRSRDDVFMSSSQLKRPMMSSRGEASGQPQMMNGGAQKLTTNDAL 320
           MKRSRDDV+MSS QLKRPM+SSRGE SGQPQM +GGAQKLTT+DAL
Sbjct: 1   MKRSRDDVYMSS-QLKRPMVSSRGEPSGQPQMTSGGAQKLTTDDAL 45


>ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1367

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = +3

Query: 183 MKRSRDDVFMSSSQLKRPMMSSRGEASGQPQMMNGGAQKLTTNDAL 320
           MKR+RDDV+MSS QLKRPM+SSRGE SGQPQM +GG QKLTTNDAL
Sbjct: 1   MKRTRDDVYMSS-QLKRPMVSSRGEPSGQPQMTSGGGQKLTTNDAL 45


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
           vinifera]
          Length = 1421

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/47 (80%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = +3

Query: 183 MKRSRDDVFMSSSQLKRPMMSSRG-EASGQPQMMNGGAQKLTTNDAL 320
           MKRSRDDV+M S QLKRP +SSRG E SGQPQMM GG QKLTTNDAL
Sbjct: 1   MKRSRDDVYMGS-QLKRPAVSSRGGEGSGQPQMMGGGTQKLTTNDAL 46


Top