BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029555
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_003605422.1| Pentatricopeptide repeat-containing protein ...   172   2e-41
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   148   5e-34
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33

>ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  192 bits (489), Expect = 2e-47
 Identities = 96/128 (75%), Positives = 110/128 (85%)
 Frame = -1

Query: 385 GNSLVNMHARAGRVECARKCFNILFEKNLISCSAGFDANVKILNSEEGLNCEIEYTGVVR 206
           GNSL+NM+AR+G +ECARK FNILFEKNLIS +   DAN K L+S+E  N E+E+TGV  
Sbjct: 387 GNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGV-G 445

Query: 205 ASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNKKAALRV 26
           AS FT+ACLLSGAACIGTI KGEQIHAL+VK GFGTNLC+NNALISMYSKCGNK+AAL+V
Sbjct: 446 ASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQV 505

Query: 25  FNDMEDRN 2
           FNDM  RN
Sbjct: 506 FNDMGYRN 513



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
 Frame = -1

Query: 385 GNSLVNMHARAGRVECARKCFNILFEKNLISCSAGFDANVKILNSEEGLN--CEIEYTGV 212
           G +LV+M+A++  VE +RK FN +   N++S +A     V+    +E +   C + + G 
Sbjct: 286 GCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH-GH 344

Query: 211 VRASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNKKAAL 32
           V  + FTF+ +L   A +   G G+Q+H   +KLG  T  CV N+LI+MY++ G  + A 
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404

Query: 31  RVFNDMEDRN 2
           + FN + ++N
Sbjct: 405 KAFNILFEKN 414


>ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355506477|gb|AES87619.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  172 bits (437), Expect = 2e-41
 Identities = 90/130 (69%), Positives = 109/130 (83%), Gaps = 2/130 (1%)
 Frame = -1

Query: 385 GNSLVNMHARAGRVECARKCFNILFEKNLISCSAGFDANVKI--LNSEEGLNCEIEYTGV 212
           GN LV+++A++GR+E ARKCF++LFEKNL+S +   D NVK   LNSE+ L+ E+EY G 
Sbjct: 404 GNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGS 463

Query: 211 VRASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNKKAAL 32
              SSFT+A LLSGAACIGTIGKGEQIHA+VVK+GF T+L VNNALISMYSKCGNK+AAL
Sbjct: 464 -GVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAAL 522

Query: 31  RVFNDMEDRN 2
           +VFNDMED N
Sbjct: 523 QVFNDMEDCN 532



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
 Frame = -1

Query: 385 GNSLVNMHARAGRVECARKCFNILFEKNLISCSAGFDANVKILNSEEG----LNCEIEYT 218
           G SLV+M+A+ G V+ ARK F+ + E N++S +A  +  V+     E     +   +   
Sbjct: 300 GCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQ 359

Query: 217 GVVRASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNKKA 38
           G V  + FTF+ +L   A +     GEQ+H   +KLG     CV N L+S+Y+K G  ++
Sbjct: 360 GGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMES 419

Query: 37  ALRVFNDMEDRN 2
           A + F+ + ++N
Sbjct: 420 ARKCFDVLFEKN 431



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
 Frame = -1

Query: 385 GNSLVNMHARA---GRVECARKCFNILFEKNLISCSAGFDANVKILNSEEGLNCEIEY-- 221
           G  L++M  +      +E ARK F+ + EKN+++ +       +   ++E ++  +E   
Sbjct: 195 GCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLV 254

Query: 220 -TGVVRASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNK 44
            +G V    FT   L+S  A I  +  G+++H+ V++ G   +LCV  +L+ MY+KCG  
Sbjct: 255 SSGYV-PDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLV 313

Query: 43  KAALRVFNDMEDRN 2
           + A +VF+ M + N
Sbjct: 314 QEARKVFDGMREHN 327


>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  148 bits (373), Expect = 5e-34
 Identities = 83/129 (64%), Positives = 98/129 (75%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 NSLVNMHARAGRVECARKCFNILFEKNLISCSAGFDANVKILNSEEGLNC--EIEYTGVV 209
           NSL++M+AR+GR++ ARK F+ILFEKNLIS +   DA  K LNSEE L    EIE  G+ 
Sbjct: 415 NSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGM- 473

Query: 208 RASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNKKAALR 29
            AS+FTFA LLSGAA IGTIGKGEQIHA V+K G   N  V NALISMYS+CGN ++A +
Sbjct: 474 GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQ 533

Query: 28  VFNDMEDRN 2
           VF DMEDRN
Sbjct: 534 VFEDMEDRN 542



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
 Frame = -1

Query: 385 GNSLVNMHARA---GRVECARKCFNILFEKNLISCSAGFDANV-KILNSEEGLNCEIEYT 218
           G  L+NM+A+    G +  ARK F+ + + N+ S +A     V K    EE L+    + 
Sbjct: 309 GCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDL---FR 365

Query: 217 GVVRA----SSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCG 50
           G++      + FTF+  L   A +  +  GEQ+    VKLGF +  CV N+LISMY++ G
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425

Query: 49  NKKAALRVFNDMEDRN 2
               A + F+ + ++N
Sbjct: 426 RIDDARKAFDILFEKN 441


>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  148 bits (373), Expect = 5e-34
 Identities = 83/129 (64%), Positives = 98/129 (75%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 NSLVNMHARAGRVECARKCFNILFEKNLISCSAGFDANVKILNSEEGLNC--EIEYTGVV 209
           NSL++M+AR+GR++ ARK F+ILFEKNLIS +   DA  K LNSEE L    EIE  G+ 
Sbjct: 415 NSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGM- 473

Query: 208 RASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNKKAALR 29
            AS+FTFA LLSGAA IGTIGKGEQIHA V+K G   N  V NALISMYS+CGN ++A +
Sbjct: 474 GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQ 533

Query: 28  VFNDMEDRN 2
           VF DMEDRN
Sbjct: 534 VFEDMEDRN 542



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
 Frame = -1

Query: 385 GNSLVNMHARA---GRVECARKCFNILFEKNLISCSAGFDANV-KILNSEEGLNCEIEYT 218
           G  L+NM+A+    G +  ARK F+ + + N+ S +A     V K    EE L+    + 
Sbjct: 309 GCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDL---FR 365

Query: 217 GVVRA----SSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCG 50
           G++      + FTF+  L   A +  +  GEQ+    VKLGF +  CV N+LISMY++ G
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425

Query: 49  NKKAALRVFNDMEDRN 2
               A + F+ + ++N
Sbjct: 426 RIDDARKAFDILFEKN 441


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  144 bits (363), Expect = 7e-33
 Identities = 79/130 (60%), Positives = 99/130 (76%), Gaps = 2/130 (1%)
 Frame = -1

Query: 385 GNSLVNMHARAGRVECARKCFNILFEKNLISCSAGFDANVKILNSEEG--LNCEIEYTGV 212
           GNSL++M+AR+GR+E ARK F+ILFEKNL+S +A  D   K L SEE   L  EI  TG+
Sbjct: 374 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 433

Query: 211 VRASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNKKAAL 32
              S+FTFA LLSGAA IG +GKGEQIH  ++K G+ +N C+ NALISMYS+CGN +AA 
Sbjct: 434 -GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 492

Query: 31  RVFNDMEDRN 2
           +VFN+MEDRN
Sbjct: 493 QVFNEMEDRN 502



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
 Frame = -1

Query: 385 GNSLVNMHARA---GRVECARKCFNILFEKNLISCSAGFDANVKILNSEEG---LNCEIE 224
           G SLV+M+A+    G V+ +RK F  + E N++S +A   A V+    ++    L C++ 
Sbjct: 269 GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM- 327

Query: 223 YTGVVRASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKCGNK 44
            +G +R + F+F+ +L     +     GEQ+++  VKLG  +  CV N+LISMY++ G  
Sbjct: 328 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 387

Query: 43  KAALRVFNDMEDRN 2
           + A + F+ + ++N
Sbjct: 388 EDARKAFDILFEKN 401



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/134 (26%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
 Frame = -1

Query: 385 GNSLVNMHAR-AGRVECARKCFNILFEKNLISCSAGFDANVKILNSEEGLNC--EIEYTG 215
           G  L++M  + +G +  A K F+ + E+NL++ +       ++  + + ++   ++E +G
Sbjct: 167 GCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSG 226

Query: 214 VVRASSFTFACLLSGAACIGTIGKGEQIHALVVKLGFGTNLCVNNALISMYSKC---GNK 44
            V    FT++ +LS    +G +  G+Q+H+ V++LG   ++CV  +L+ MY+KC   G+ 
Sbjct: 227 YV-PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 285

Query: 43  KAALRVFNDMEDRN 2
             + +VF  M + N
Sbjct: 286 DDSRKVFEQMPEHN 299