BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029547
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containi...    62   5e-08
ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08

>ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 693

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 52/111 (46%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = +1

Query: 112 MAQAYPLCSSPSSSFCDLKHMTTPISSSYSLINLKLPNFR--PSHKLFPLNPQSKTFLQQ 285
           MAQ YPLCSS S+S           SS Y     ++P F   PSH        SKT L  
Sbjct: 1   MAQPYPLCSSRSAS---------SFSSHY-----RIPFFTIIPSH--------SKTLLHA 38

Query: 286 PTFSSSQDTIPQVTQSSNSLEDATELDDPDAKSSPLSKTRIWVNPRSPRAK 438
           P FS          Q  N+L+DA +LDDPDAKS  LSK   WVNPRSPRAK
Sbjct: 39  PRFSF---------QPFNTLQDAAKLDDPDAKSPSLSKKSFWVNPRSPRAK 80


>ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 705

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/103 (42%), Positives = 53/103 (51%)
 Frame = +1

Query: 130 LCSSPSSSFCDLKHMTTPISSSYSLINLKLPNFRPSHKLFPLNPQSKTFLQQPTFSSSQD 309
           +C+S SS F D  +++T ISSS+SL N K PN   SHK   L+ ++   L Q   S    
Sbjct: 5   ICASHSSLFHDRHYVSTSISSSFSLRNFKFPNAASSHKSLSLHSKASQALHQDAASH--- 61

Query: 310 TIPQVTQSSNSLEDATELDDPDAKSSPLSKTRIWVNPRSPRAK 438
                              DPDA S  LSKTRIWVNP SPRAK
Sbjct: 62  -------------------DPDANSLSLSKTRIWVNPNSPRAK 85


>ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 692

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 52/111 (46%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
 Frame = +1

Query: 112 MAQAYPLCSSPSSSFCDLKHMTTPISSSYSLINLKLPNFR--PSHKLFPLNPQSKTFLQQ 285
           MAQ YPLC SPS+S             S+S  + ++P F   PSH        SKT L  
Sbjct: 1   MAQPYPLCPSPSAS-------------SFSF-HSRIPFFTIVPSH--------SKTLLHA 38

Query: 286 PTFSSSQDTIPQVTQSSNSLEDATELDDPDAKSSPLSKTRIWVNPRSPRAK 438
           P FS          Q  N+L+DA +LDDPDAKS  LSK  IWVNPRSPRAK
Sbjct: 39  PRFS---------LQPVNTLQDA-KLDDPDAKSPSLSKNSIWVNPRSPRAK 79


>ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 706

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/95 (44%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +1

Query: 160 DLKHMTTPISS--SYSLINLKLPNFRPSHKLFPLNPQSKTFLQQPTFSSSQDTIPQVTQS 333
           D++    P SS  SYS  + KLPNF  SH       Q KT LQ                 
Sbjct: 40  DIRMSKEPPSSVPSYSSRHFKLPNFSSSH-------QPKTLLQD---------------- 76

Query: 334 SNSLEDATELDDPDAKSSPLSKTRIWVNPRSPRAK 438
                   +LDDP+AKSSPLSKT IWVNP+SPRAK
Sbjct: 77  -------AKLDDPNAKSSPLSKTSIWVNPKSPRAK 104


>ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 700

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 53/122 (43%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
 Frame = +1

Query: 112 MAQAYPLCSSPSSS------------FCDLKHMTTPISSSYSLINLKLPNFRPSHKLFPL 255
           MAQ+Y +CSS SSS            F   K +TT IS S    + KLP F  SH     
Sbjct: 1   MAQSYLICSSSSSSSSSSSSPPCSSAFHYRKPITTSISFSCFSRHFKLPTFPLSH----- 55

Query: 256 NPQSKTFLQ-QPTFSSSQDTIPQVTQSSNSLEDATELDDPDAKSSPLSKTRIWVNPRSPR 432
           NP  KT LQ Q T++      PQ               DPDAKSS LSKT IWVNP+SPR
Sbjct: 56  NP--KTLLQVQATYT------PQ---------------DPDAKSSSLSKTSIWVNPKSPR 92

Query: 433 AK 438
            K
Sbjct: 93  VK 94