BLASTX nr result

ID: Glycyrrhiza24_contig00029545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029545
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62317.1| hypothetical protein VITISV_026526 [Vitis vinifera]   104   7e-21
emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]   104   9e-21
gb|AFN88207.1| integrase core domain containing protein [Phaseol...   103   1e-20
emb|CAN81916.1| hypothetical protein VITISV_038548 [Vitis vinifera]   102   4e-20
emb|CAN71773.1| hypothetical protein VITISV_002508 [Vitis vinifera]   100   2e-19

>emb|CAN62317.1| hypothetical protein VITISV_026526 [Vitis vinifera]
          Length = 768

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/94 (51%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   TRSLDCAISFTKDSIFLQDRSSGQTIGIKCESNGLYYL--PDHPCVCIATDSPLLIHAQQ 176
           TR+L+C+I+F+  S+ LQDRS+G+TIGI  ES GLY+L  P  P  CI+TD+PLLIH++ 
Sbjct: 343 TRTLNCSITFSNKSVILQDRSTGKTIGIGRESQGLYHLTSPSSPAACISTDAPLLIHSRL 402

Query: 177 GDPRLAKLQTLILSLSKLSTMSCKSCQLGSRSKI 278
           G P L+K Q ++   S LS+++C+SCQLG  +++
Sbjct: 403 GHPSLSKFQKMVPHFSTLSSLTCESCQLGKHTRV 436


>emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]
          Length = 1258

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/95 (51%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   TRSLDCAISFTKDSIFLQDRSSGQTIGIKCESNGLYYLPD-HPCVCIATDSPLLIHAQQG 179
           TR+L+C+I+F+   + LQDRS+G+TIGI  ES GLY+L    P VCI+TD+PLLIH++ G
Sbjct: 361 TRTLNCSITFSDKFVTLQDRSTGKTIGIGRESQGLYHLTSPSPAVCISTDAPLLIHSRLG 420

Query: 180 DPRLAKLQTLILSLSKLSTMSCKSCQLGSRSKILS 284
            P L+K Q ++ + S LS+++C+SCQLG  +++LS
Sbjct: 421 HPSLSKFQKMVPNFSSLSSLACESCQLGKHTRVLS 455


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/87 (60%), Positives = 63/87 (72%)
 Frame = +3

Query: 3   TRSLDCAISFTKDSIFLQDRSSGQTIGIKCESNGLYYLPDHPCVCIATDSPLLIHAQQGD 182
           TRSLDC ISFTKDS+ LQDR SG+ IG  CES+GLY L     V    DSP LIHA+ G 
Sbjct: 430 TRSLDCVISFTKDSVSLQDRCSGRMIGTGCESHGLYQLQISAHVGAIMDSPSLIHARLGH 489

Query: 183 PRLAKLQTLILSLSKLSTMSCKSCQLG 263
           P LAK+Q L+ SLS +S++SC+SCQ G
Sbjct: 490 PSLAKMQQLVPSLSNVSSLSCESCQFG 516


>emb|CAN81916.1| hypothetical protein VITISV_038548 [Vitis vinifera]
          Length = 1202

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/93 (51%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   TRSLDCAISFTKDSIFLQDRSSGQTIGIKCESNGLYYLPD-HPCVCIATDSPLLIHAQQG 179
           TR+L+C+I+F+   + LQDRS+G+TIGI+ ES GLY+L    P VCI+TD+PLLIH+  G
Sbjct: 388 TRTLNCSITFSDKFVTLQDRSTGKTIGIRRESQGLYHLTSPSPAVCISTDAPLLIHSCLG 447

Query: 180 DPRLAKLQTLILSLSKLSTMSCKSCQLGSRSKI 278
            P L+K Q ++ S S LS ++C+SCQLG  +++
Sbjct: 448 HPNLSKFQKMVPSFSSLSLLACESCQLGKHTRV 480


>emb|CAN71773.1| hypothetical protein VITISV_002508 [Vitis vinifera]
          Length = 680

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/94 (50%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   TRSLDCAISFTKDSIFLQDRSSGQTIGIKCESNGLYYLPDH--PCVCIATDSPLLIHAQQ 176
           TR+L+C+I+F+   + LQDRS+G+TIGI  +S GLY+L     P VCI+TD+PLLIH++ 
Sbjct: 412 TRTLNCSITFSNKFVTLQDRSTGKTIGIGRDSQGLYHLTSDSSPAVCISTDAPLLIHSRL 471

Query: 177 GDPRLAKLQTLILSLSKLSTMSCKSCQLGSRSKI 278
           G P L+K Q ++   S LS++SC+SCQLG  +++
Sbjct: 472 GHPSLSKFQKMVPHFSTLSSLSCESCQLGKHTRV 505


Top