BLASTX nr result

ID: Glycyrrhiza24_contig00029533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029533
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626181.1| PHD and RING finger domain-containing protei...   171   7e-41
ref|XP_003555617.1| PREDICTED: uncharacterized protein LOC100797...   166   2e-39
ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap...   120   1e-25

>ref|XP_003626181.1| PHD and RING finger domain-containing protein [Medicago truncatula]
           gi|355501196|gb|AES82399.1| PHD and RING finger
           domain-containing protein [Medicago truncatula]
          Length = 904

 Score =  171 bits (432), Expect = 7e-41
 Identities = 86/118 (72%), Positives = 93/118 (78%)
 Frame = -2

Query: 354 LMLLCDICDSPAHTYCVGLGREVPEGNWYCNGCRPVALASSNSQVQECVADSRVTNQNLP 175
           LMLLCDICDSPAHTYCVGLGREVPEGNWYC+GCRPVALAS NSQ QE  +D R   Q+LP
Sbjct: 527 LMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALASLNSQAQE--SDLRAATQSLP 584

Query: 174 ARPSPVLHTRESIDLNLMSSPHTSFTQXXXXXXXXXXXXXSVDGTSPISGGGAPTLSE 1
           +RPSPV H RESIDLNLMSSPHTSF+Q             S +G SP+SGGGAPTLSE
Sbjct: 585 SRPSPV-HIRESIDLNLMSSPHTSFSQGFGHLSSSRFSGRSTEGASPMSGGGAPTLSE 641


>ref|XP_003555617.1| PREDICTED: uncharacterized protein LOC100797448 [Glycine max]
          Length = 813

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/118 (70%), Positives = 91/118 (77%)
 Frame = -2

Query: 354 LMLLCDICDSPAHTYCVGLGREVPEGNWYCNGCRPVALASSNSQVQECVADSRVTNQNLP 175
           LMLLCDICDSPAHTYCVGLGREVPEGNWYC+GCRPVAL SS+SQVQE VAD RV+ Q+ P
Sbjct: 466 LMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQVQEGVADPRVSVQSHP 525

Query: 174 ARPSPVLHTRESIDLNLMSSPHTSFTQXXXXXXXXXXXXXSVDGTSPISGGGAPTLSE 1
            RP PVLH RESIDLNL+SSP  +F Q             S +G SP+S GGAPTLSE
Sbjct: 526 VRPPPVLHVRESIDLNLISSPRAAFNQGFGHLPSSRFSGRSAEGASPVS-GGAPTLSE 582


>ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|222857869|gb|EEE95416.1|
           predicted protein [Populus trichocarpa]
          Length = 810

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/117 (50%), Positives = 76/117 (64%)
 Frame = -2

Query: 354 LMLLCDICDSPAHTYCVGLGREVPEGNWYCNGCRPVALASSNSQVQECVADSRVTNQNLP 175
           LMLLCD+CDS AHTYCVGLGR+VPEGNWYC+ CRPVAL S++SQ Q+ + D   ++ N+ 
Sbjct: 426 LMLLCDLCDSSAHTYCVGLGRQVPEGNWYCDDCRPVALGSTSSQAQDPLPDQWNSSNNIF 485

Query: 174 ARPSPVLHTRESIDLNLMSSPHTSFTQXXXXXXXXXXXXXSVDGTSPISGGGAPTLS 4
            RPSP+L+  E +D NL S+P  +  Q              +   SP+S  GA TLS
Sbjct: 486 NRPSPILNLDEGLDPNLESAPRLTIPQVSGSLSSPRFLTGDIHVASPVSVAGASTLS 542


>ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|222871639|gb|EEF08770.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/117 (52%), Positives = 74/117 (63%)
 Frame = -2

Query: 354 LMLLCDICDSPAHTYCVGLGREVPEGNWYCNGCRPVALASSNSQVQECVADSRVTNQNLP 175
           LMLLCD+CDS AHTYCVGLGR+VPEGNWYC+ CRPVAL SS+SQ Q+ + D    + N+ 
Sbjct: 351 LMLLCDLCDSSAHTYCVGLGRQVPEGNWYCDDCRPVALGSSSSQTQDSLPDQWNISSNIF 410

Query: 174 ARPSPVLHTRESIDLNLMSSPHTSFTQXXXXXXXXXXXXXSVDGTSPISGGGAPTLS 4
            RPS +L+  E +D NL SSP  +  Q                  SP+SG GA TLS
Sbjct: 411 NRPSLMLNLEEGLDPNLESSPRLTVPQAFGSLSSPRFPTGDNHVASPVSGAGASTLS 467


>ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
           putative [Ricinus communis] gi|223548440|gb|EEF49931.1|
           splicing factor, arginine/serine-rich 2,rnap interacting
           protein, putative [Ricinus communis]
          Length = 791

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/118 (50%), Positives = 73/118 (61%)
 Frame = -2

Query: 354 LMLLCDICDSPAHTYCVGLGREVPEGNWYCNGCRPVALASSNSQVQECVADSRVTNQNLP 175
           LMLLCD+CDSPAHT+CVGLGR+VPEGNWYC  CRPVAL S++SQ  + + D R TN N+ 
Sbjct: 412 LMLLCDLCDSPAHTFCVGLGRQVPEGNWYCEVCRPVALGSTSSQALDPMPDQRTTN-NIF 470

Query: 174 ARPSPVLHTRESIDLNLMSSPHTSFTQXXXXXXXXXXXXXSVDGTSPISGGGAPTLSE 1
           +RPSP  ++ E  D     SP  +F                V   SP+SG G  TLS+
Sbjct: 471 SRPSPDTNSVEGFDATSEPSPRLAFAPGFGSLSSPRFPAGDVQAASPVSGAGGSTLSQ 528


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