BLASTX nr result

ID: Glycyrrhiza24_contig00029527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029527
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598671.1| Resistance protein [Medicago truncatula] gi|...    86   3e-15
ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Gl...    86   4e-15
ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vi...    85   5e-15
emb|CAN82538.1| hypothetical protein VITISV_004290 [Vitis vinifera]    85   5e-15
ref|XP_003617519.1| TMV resistance protein N [Medicago truncatul...    84   1e-14

>ref|XP_003598671.1| Resistance protein [Medicago truncatula]
           gi|355487719|gb|AES68922.1| Resistance protein [Medicago
           truncatula]
          Length = 1158

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/62 (62%), Positives = 48/62 (77%)
 Frame = +2

Query: 71  SYDVFLGFRGEDTRYTFTANLYHALRNKRFKVFMDQRELKSGEQISPTLITAIQESRVSV 250
           +YDVFL FRGEDTRY FT +LY+AL  +    FMD  E+K GEQISPTL  AIQESR+++
Sbjct: 16  TYDVFLSFRGEDTRYGFTGHLYNALHQRGINTFMDDEEIKRGEQISPTLFKAIQESRIAI 75

Query: 251 VV 256
           +V
Sbjct: 76  IV 77


>ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1464

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/63 (58%), Positives = 49/63 (77%)
 Frame = +2

Query: 68  WSYDVFLGFRGEDTRYTFTANLYHALRNKRFKVFMDQRELKSGEQISPTLITAIQESRVS 247
           W+YDVFL FRGEDTR TFT +LYH L  +   VF+D  +L+ GE+ISP LI AI+ESR++
Sbjct: 18  WTYDVFLSFRGEDTRRTFTGSLYHGLHQRGINVFIDDEKLRRGEEISPALIGAIEESRIA 77

Query: 248 VVV 256
           ++V
Sbjct: 78  IIV 80


>ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/64 (60%), Positives = 49/64 (76%)
 Frame = +2

Query: 68  WSYDVFLGFRGEDTRYTFTANLYHALRNKRFKVFMDQRELKSGEQISPTLITAIQESRVS 247
           W Y VFL FRGEDTR  FT +LY AL  K  + FMD ++L++GE+ISPTL+TAIQ SR S
Sbjct: 18  WKYAVFLSFRGEDTRNNFTGHLYKALDQKGIETFMDDKKLRTGEEISPTLVTAIQRSRCS 77

Query: 248 VVVL 259
           ++VL
Sbjct: 78  IIVL 81


>emb|CAN82538.1| hypothetical protein VITISV_004290 [Vitis vinifera]
          Length = 1241

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/64 (60%), Positives = 49/64 (76%)
 Frame = +2

Query: 68  WSYDVFLGFRGEDTRYTFTANLYHALRNKRFKVFMDQRELKSGEQISPTLITAIQESRVS 247
           W Y VFL FRGEDTR  FT +LY AL  K  + FMD ++L++GE+ISPTL+TAIQ SR S
Sbjct: 77  WKYAVFLSFRGEDTRNNFTGHLYKALDQKGIETFMDDKKLRTGEEISPTLVTAIQRSRCS 136

Query: 248 VVVL 259
           ++VL
Sbjct: 137 IIVL 140


>ref|XP_003617519.1| TMV resistance protein N [Medicago truncatula]
           gi|355518854|gb|AET00478.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 324

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/62 (64%), Positives = 49/62 (79%)
 Frame = +2

Query: 74  YDVFLGFRGEDTRYTFTANLYHALRNKRFKVFMDQRELKSGEQISPTLITAIQESRVSVV 253
           YDVFL F GEDTRY+FT  LYHAL N+ FK+FMD   L+ G QIS TL+ AI++SR+S+V
Sbjct: 170 YDVFLSFCGEDTRYSFTGFLYHALSNEGFKIFMDDEGLEGGNQISQTLLEAIEKSRLSIV 229

Query: 254 VL 259
           VL
Sbjct: 230 VL 231



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
 Frame = +2

Query: 68  WSYDVFLGFRGEDTRYTFTANLYHALRNKRFKVF----MDQRELKSGEQISPT-LITAIQ 232
           + YDVFL FRGEDT  TFT NLYH L NKR K F      Q +    EQ+  + ++ AI+
Sbjct: 9   YMYDVFLCFRGEDTYCTFTGNLYHGLSNKRIKTFFFPHQIQNDYNDNEQLQHSPILKAIR 68

Query: 233 ESRVSVVVL 259
           ESR+S+VVL
Sbjct: 69  ESRISIVVL 77


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