BLASTX nr result

ID: Glycyrrhiza24_contig00029514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029514
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    42   8e-06

>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 42.4 bits (98), Expect(2) = 8e-06
 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 161 PPDG*WTKCNSDGSLAGN-GVATCGGVLRDSYGRWL 265
           P DG W K N+DG+  GN G AT GGVLRD  G W+
Sbjct: 156 PEDG-WVKLNTDGASRGNPGFATAGGVLRDHNGAWI 190



 Score = 32.0 bits (71), Expect(2) = 8e-06
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 258 GGFSQRLGTCSVLMAELWGILTSL 329
           GGF+  +G CS  +AELWG+   L
Sbjct: 191 GGFAVNIGVCSAPLAELWGVYYGL 214


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