BLASTX nr result

ID: Glycyrrhiza24_contig00029506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029506
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529725.1| PREDICTED: uncharacterized protein LOC100784...    97   1e-18
ref|XP_003533002.1| PREDICTED: uncharacterized protein LOC100806...    91   1e-16
gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucum...    58   7e-07
ref|XP_003546714.1| PREDICTED: uncharacterized protein LOC100788...    57   2e-06
gb|AAF79484.1|AC022492_28 F1L3.18 [Arabidopsis thaliana]               55   4e-06

>ref|XP_003529725.1| PREDICTED: uncharacterized protein LOC100784093 [Glycine max]
          Length = 433

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/70 (68%), Positives = 54/70 (77%)
 Frame = -2

Query: 211 GRWFKSLISLRKPSPNDQEKGSDKSKRKWKLWRNSSEGFGFGSSVKKGHIGGAHDSKSYC 32
           GRW KSLISLRKPS  DQEKG DKSKRKWKLW+++SEGFG GSS++KGH GG        
Sbjct: 5   GRWLKSLISLRKPSTIDQEKGGDKSKRKWKLWKSTSEGFGIGSSMQKGHGGG-------- 56

Query: 31  SSFVVDEEAF 2
            SFVVD+ AF
Sbjct: 57  GSFVVDDGAF 66


>ref|XP_003533002.1| PREDICTED: uncharacterized protein LOC100806397 [Glycine max]
          Length = 421

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/70 (64%), Positives = 51/70 (72%)
 Frame = -2

Query: 211 GRWFKSLISLRKPSPNDQEKGSDKSKRKWKLWRNSSEGFGFGSSVKKGHIGGAHDSKSYC 32
           GRW KSLISLR+PSP DQEKG  KSKR+WKLW+++SEGFG GSS+ KG  GG        
Sbjct: 5   GRWLKSLISLRRPSPTDQEKGGGKSKRQWKLWKSTSEGFGIGSSMHKGQGGG-------- 56

Query: 31  SSFVVDEEAF 2
            SFVVD  AF
Sbjct: 57  GSFVVDGGAF 66


>gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
           melo]
          Length = 699

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
 Frame = -2

Query: 205 WFKSLISLRKPSP-NDQEKGSDKSKRKWKLWRNSSEGFGFGSSVKKGHIG---GAHDSK 41
           W KSLIS +K  P  +QEK  D+SK+KW+LWR+ S+G+G    + KG       +HDSK
Sbjct: 7   WLKSLISHKKSHPVTEQEKVGDRSKKKWRLWRSVSDGYGSSGKITKGEFAESTESHDSK 65


>ref|XP_003546714.1| PREDICTED: uncharacterized protein LOC100788715 [Glycine max]
          Length = 416

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = -2

Query: 211 GRWFKSLISLRKPSPN--DQEKGSD-KSKRKWKLWRNSSEGFGFGSSVKKGHIGG 56
           GRWFKSL+  RK S +  DQ+KG D KSK+KWKLWR SSEG     S+KK   GG
Sbjct: 5   GRWFKSLLPFRKTSTSTTDQDKGGDNKSKKKWKLWRASSEG-----SMKKVGGGG 54


>gb|AAF79484.1|AC022492_28 F1L3.18 [Arabidopsis thaliana]
          Length = 427

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 34/68 (50%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = -2

Query: 211 GRWFKSLISLRKPSPNDQEKGSDK-SKRKWKLWRNSSEGFGFGSSVKKGHIGGAHDSKSY 35
           G W +SLIS RKP  + QEK SDK SK+KWKLWR SSE     S   +G    A    S 
Sbjct: 5   GNWIRSLISNRKPVNDQQEKLSDKSSKKKWKLWRISSESLASSSFKSRGSY-AASSLGSE 63

Query: 34  CSSFVVDE 11
             SF  DE
Sbjct: 64  LPSFSADE 71


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