BLASTX nr result

ID: Glycyrrhiza24_contig00029472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029472
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602049.1| hypothetical protein MTR_3g088400 [Medicago ...   104   7e-21
ref|XP_002307455.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002520331.1| conserved hypothetical protein [Ricinus comm...    76   3e-12

>ref|XP_003602049.1| hypothetical protein MTR_3g088400 [Medicago truncatula]
           gi|357520349|ref|XP_003630463.1| hypothetical protein
           MTR_8g095810 [Medicago truncatula]
           gi|355491097|gb|AES72300.1| hypothetical protein
           MTR_3g088400 [Medicago truncatula]
           gi|355524485|gb|AET04939.1| hypothetical protein
           MTR_8g095810 [Medicago truncatula]
          Length = 169

 Score =  104 bits (260), Expect = 7e-21
 Identities = 57/100 (57%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   SFKKPGAVPFKWEIKPGLPIISTXXXXXXXXXXXVXXXXXXXXXXXXSAGSSYLLSPVEP 182
           SFKKPG+VPFKWEIKPGLPI              +                SY LSPVEP
Sbjct: 8   SFKKPGSVPFKWEIKPGLPIPHHHHQNPESPSFKLKPPPQL---------GSYKLSPVEP 58

Query: 183 RTRSFRSNSRARSDRWRFQRPLLARPESV-SSGCFFSPFL 299
           RTRSFRS+ +  S+RWRF+RPLLA+PE V SSGCFFSPFL
Sbjct: 59  RTRSFRSSPKVGSERWRFERPLLAQPECVTSSGCFFSPFL 98


>ref|XP_002307455.1| predicted protein [Populus trichocarpa] gi|222856904|gb|EEE94451.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/114 (41%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
 Frame = +3

Query: 3   SFKKPGAVPFKWEIKPGLPIISTXXXXXXXXXXXVXXXXXXXXXXXXSAGS--------- 155
           SFKKPGAVPFKWEI+PG+P I                                       
Sbjct: 8   SFKKPGAVPFKWEIRPGVPKIQRQQKQQKKELSPPTLPSPSPPFNHRRPSPTPQVQKQKL 67

Query: 156 ------SYLLSPVEPRTRSFRSNSRARSDRWRFQRPLLARPESVSSGCFFSPFL 299
                 S  L P EPR  SFRS  R+RS RWRF++P   RPE VS GCF SP L
Sbjct: 68  KPPPARSVFLPPPEPRAHSFRSAPRSRSGRWRFEQPTHVRPECVSPGCFPSPLL 121


>ref|XP_002520331.1| conserved hypothetical protein [Ricinus communis]
           gi|223540550|gb|EEF42117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 196

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/116 (40%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
 Frame = +3

Query: 3   SFKKPGAVPFKWEIKPGLPIISTXXXXXXXXXXXVXXXXXXXXXXXXSAG---------- 152
           SFKKPGAVPFKWEI+PG+P I             +            S            
Sbjct: 6   SFKKPGAVPFKWEIRPGVPKIQHHQQPKQLSPPKLPSPSPPFNLRRPSVSPLPTPQPQLK 65

Query: 153 ------SSYLLSPVEPRTRSFRSNSRARSDRWRFQRPLLARPESVSSGCF-FSPFL 299
                     L P EPRT SFRS  R RS+RWRF +P    PE VS GCF  SP L
Sbjct: 66  LKPPPAGFIFLPPPEPRTHSFRSAPRTRSERWRFDQPTRVGPECVSPGCFPSSPLL 121


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