BLASTX nr result

ID: Glycyrrhiza24_contig00029459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029459
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520156.1| PREDICTED: tRNA-specific adenosine deaminase...   154   7e-36
ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase...    65   7e-09

>ref|XP_003520156.1| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
           [Glycine max]
          Length = 1329

 Score =  154 bits (389), Expect = 7e-36
 Identities = 93/162 (57%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
 Frame = -1

Query: 482 ERFDRIPXXXXXXXXXXXXCALSTYRVPIKPCLLNGLRQSTLLQLSASRRLILGGEEQYF 303
           ERFDR P            C++STYRVPIKPCL+NGLRQS LLQLSASRRLILGG + Y 
Sbjct: 32  ERFDRTPSYCLSCCGCCDYCSVSTYRVPIKPCLINGLRQSALLQLSASRRLILGGGDHYL 91

Query: 302 SRVPTYGVLRGCYELKCAANDRT---VCNRRRIKERCFHAASQKGRENFPXXXXXXXXXX 132
           SR+P YGVLRGC EL  + N+RT     +R RIK R   AASQKGRE             
Sbjct: 92  SRLPAYGVLRGCQELNSSVNERTDYSSSSRWRIKGRYIRAASQKGREFSHSFGSDGAEAV 151

Query: 131 XXXXXXEADKDATGIKWKNVSSSKRMEAKKKRKNVSRERHLS 6
                 EADKDA   K KN SSSKR+E   KRKNVSRE+HLS
Sbjct: 152 LSLLSEEADKDAICSKCKNASSSKRVEV-DKRKNVSREKHLS 192


>ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|222852178|gb|EEE89725.1|
           predicted protein [Populus trichocarpa]
          Length = 1364

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/62 (48%), Positives = 39/62 (62%)
 Frame = -1

Query: 407 RVPIKPCLLNGLRQSTLLQLSASRRLILGGEEQYFSRVPTYGVLRGCYELKCAANDRTVC 228
           R PI P L  G RQST++Q   SRRLILGG ++Y+ R P YG+  GCYE  C+  ++   
Sbjct: 72  RAPINPGLFFGFRQSTIIQCPPSRRLILGGRDRYYYRSPAYGLDHGCYEDSCSFKEKNGS 131

Query: 227 NR 222
            R
Sbjct: 132 ER 133


>ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
           [Vitis vinifera]
          Length = 1342

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 43/106 (40%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
 Frame = -1

Query: 479 RFDRIPXXXXXXXXXXXXCALSTYRVPIKPCLLNGLRQSTLLQLSASRRLILGGEEQYFS 300
           RFDR P             A   + VPI P  L GLRQSTL+Q + SRRLILG  ++Y+ 
Sbjct: 16  RFDRTPLTSSSSCCACCG-ANFIHGVPINPGFLYGLRQSTLIQWAPSRRLILGAGDRYYC 74

Query: 299 RVPTYGVLRGCYELKCAANDRT----VCNRRRIKERCFHAASQKGR 174
           R+P     RGCYE+ C   +R+       RRR K  C  +  + GR
Sbjct: 75  RLPD----RGCYEVCCTLKERSGNGGGGRRRRGKIECMVSEGKSGR 116


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