BLASTX nr result

ID: Glycyrrhiza24_contig00029424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029424
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                    56   3e-06
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...    56   3e-06

>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/59 (42%), Positives = 31/59 (52%)
 Frame = +3

Query: 96   LNVDGSSLENPEPSGFGGLLRSGDGEWNSGFYGSIGISDNXXXXXXXXXXXXSFAWDSG 272
            LNVDG  ++NP  +G+GGL R  DG W  GFYGS+G +                AWD G
Sbjct: 1185 LNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLITAWDFG 1243


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
            gi|355500090|gb|AES81293.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1579

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/59 (42%), Positives = 31/59 (52%)
 Frame = +3

Query: 96   LNVDGSSLENPEPSGFGGLLRSGDGEWNSGFYGSIGISDNXXXXXXXXXXXXSFAWDSG 272
            LNVDG  ++NP  +G+GGL R  DG W  GFYGS+G +                AWD G
Sbjct: 1368 LNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLITAWDFG 1426


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