BLASTX nr result

ID: Glycyrrhiza24_contig00029417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029417
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606095.1| Transcription factor E2F [Medicago truncatul...    66   3e-09
ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    62   5e-08
ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    62   5e-08
ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [G...    62   5e-08
ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [G...    61   1e-07

>ref|XP_003606095.1| Transcription factor E2F [Medicago truncatula]
           gi|355507150|gb|AES88292.1| Transcription factor E2F
           [Medicago truncatula]
          Length = 460

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
 Frame = -3

Query: 172 MKRRQLPIYSTKPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP---RKSDIADFEADSG 2
           M++RQLP  S KPPF     YHRFA DH      + EAIVVK+P   RKS+ ADFEADSG
Sbjct: 17  MQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSG 76


>ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = -3

Query: 217 HTPDLPSQSISIAHSMKRRQLPIYSTKPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP- 41
           H PD       I HS+KR QLP  S KPPFA +G YHRF  D     Q + +AI+VKSP 
Sbjct: 12  HLPD------QIMHSLKR-QLPFSSMKPPFASSGDYHRFTPDSRLADQ-EPDAILVKSPQ 63

Query: 40  --RKSDIADFEADS 5
             RKS++AD+EA+S
Sbjct: 64  LKRKSEVADYEAES 77


>ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = -3

Query: 217 HTPDLPSQSISIAHSMKRRQLPIYSTKPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP- 41
           H PD       I HS+KR QLP  S KPPFA +G YHRF  D     Q + +AI+VKSP 
Sbjct: 12  HLPD------QIMHSLKR-QLPFSSMKPPFASSGDYHRFTPDSRLADQ-EPDAILVKSPQ 63

Query: 40  --RKSDIADFEADS 5
             RKS++AD+EA+S
Sbjct: 64  LKRKSEVADYEAES 77


>ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 435

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/58 (60%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -3

Query: 166 RRQLPIYSTKPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP---RKSDIADFEADSG 2
           +RQLP  S KPPF   G YHRFA D      + AEAIVVK+P   RKS+ ADFEADSG
Sbjct: 2   KRQLPFSSMKPPFVAAGDYHRFAPDQ---RHDAAEAIVVKTPQLKRKSEAADFEADSG 56


>ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 450

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = -3

Query: 220 THTPDLPSQSISIAHSMKRRQLPIYSTKPPFAPNGGYHRFASDHCPPPQNDAEAIVVKSP 41
           +  P   +    I HSMKR QLP  S KPPF   G YHR          + AEAIVVK+P
Sbjct: 4   SRAPPAANPPDQIMHSMKR-QLPFSSMKPPFVAAGDYHR---------HDAAEAIVVKTP 53

Query: 40  ---RKSDIADFEADSG 2
              RKS++ADFEADSG
Sbjct: 54  LLKRKSEVADFEADSG 69


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