BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029378
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   317   5e-85
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...   305   2e-81
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   305   3e-81
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              281   3e-74
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   281   3e-74

>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  317 bits (813), Expect = 5e-85
 Identities = 158/177 (89%), Positives = 165/177 (93%)
 Frame = -3

Query: 533  GTLFKNLMAILRDVVICYDRTVRNVCSNSIIQFEYGIQAGDKAQHLFPAGEPVGVLAATS 354
            GTLFKNLMAILRDVVICYD TVRNVCSNSIIQFEYGIQ+GD AQHLFPAGEPVGVLAATS
Sbjct: 866  GTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDAAQHLFPAGEPVGVLAATS 925

Query: 353  MSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPIDRRVILYLNDCDCGRSYCREKA 174
            MSNPAYKAVLDASPSSNSSW FMKEILLCKVNFRNEP DRRVILYLNDCDCGR+YCRE A
Sbjct: 926  MSNPAYKAVLDASPSSNSSWGFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRNYCRENA 985

Query: 173  ACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTEDAGLVGHIHLNELMLEELKIDM 3
            A LV+NQLRKVSLKD A+DFIVEYQQQR+RRD TEDAGLV HI L E+ LEELKI+M
Sbjct: 986  AYLVQNQLRKVSLKDAALDFIVEYQQQRRRRDGTEDAGLVCHIRLKEVKLEELKINM 1042


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score =  305 bits (782), Expect = 2e-81
 Identities = 150/178 (84%), Positives = 166/178 (93%), Gaps = 1/178 (0%)
 Frame = -3

Query: 533  GTLFKNLMAILRDVVICYDRTVRNVCSNSIIQFEYGIQAGDKAQHLFPAGEPVGVLAATS 354
            GTLFKNLMAILRDVVICYD TVRN+CSNSIIQFEYGIQAGDK +HLFPAGEPVGVLAAT+
Sbjct: 784  GTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKTEHLFPAGEPVGVLAATA 843

Query: 353  MSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPIDRRVILYLNDCDCGRSYCREKA 174
            MSNPAYKAVLDASP+SNSSWE MKEILLCKVNFRNEP+DRRVILYLNDCDCG S CRE A
Sbjct: 844  MSNPAYKAVLDASPNSNSSWELMKEILLCKVNFRNEPVDRRVILYLNDCDCGGSCCRENA 903

Query: 173  ACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTE-DAGLVGHIHLNELMLEELKIDM 3
            A  VKNQLRKVSLK+ AV+FI+EYQQQR +++++E DAGLVGHI+L+E+MLEELKI M
Sbjct: 904  AYSVKNQLRKVSLKNAAVEFIIEYQQQRTQKENSETDAGLVGHIYLDEMMLEELKISM 961


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score =  305 bits (781), Expect = 3e-81
 Identities = 150/178 (84%), Positives = 166/178 (93%), Gaps = 1/178 (0%)
 Frame = -3

Query: 533  GTLFKNLMAILRDVVICYDRTVRNVCSNSIIQFEYGIQAGDKAQHLFPAGEPVGVLAATS 354
            GTLFKNLMAILRDVVICYD TVRN+CSNSIIQFEYGIQAGDK++HLFPAGEPVGVLAAT+
Sbjct: 784  GTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKSEHLFPAGEPVGVLAATA 843

Query: 353  MSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPIDRRVILYLNDCDCGRSYCREKA 174
            MSNPAYKAVLDASPSSNSSWE MKEILLCKVNFRNE +DRRVILYLNDCDCG SYCRE A
Sbjct: 844  MSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNELVDRRVILYLNDCDCGGSYCRENA 903

Query: 173  ACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTE-DAGLVGHIHLNELMLEELKIDM 3
            A  VK+QLRKVSLKD AV+FI+EYQQQR +++++E D GLVGHI+L+E+MLEELKI M
Sbjct: 904  AYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHIYLDEMMLEELKISM 961


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  281 bits (720), Expect = 3e-74
 Identities = 138/178 (77%), Positives = 156/178 (87%), Gaps = 1/178 (0%)
 Frame = -3

Query: 533  GTLFKNLMAILRDVVICYDRTVRNVCSNSIIQFEYGIQAGDKAQHLFPAGEPVGVLAATS 354
            GTLFKNLMAILRDVVICYD TVRNVCSNSIIQFEYG++A  K QH FPAGEPVGVLAAT+
Sbjct: 840  GTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATA 899

Query: 353  MSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPIDRRVILYLNDCDCGRSYCREKA 174
            MSNPAYKAVLD+SPSSNSSWE MKEILLC+VNF+N+ IDRRVILYLNDCDCGR YCRE A
Sbjct: 900  MSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENA 959

Query: 173  ACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTE-DAGLVGHIHLNELMLEELKIDM 3
            A LVKNQL+K SLKDTAV+F++EY +Q     S+E   GLVGHIHLN+L+L++L + M
Sbjct: 960  AYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSM 1017


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  281 bits (720), Expect = 3e-74
 Identities = 138/178 (77%), Positives = 156/178 (87%), Gaps = 1/178 (0%)
 Frame = -3

Query: 533  GTLFKNLMAILRDVVICYDRTVRNVCSNSIIQFEYGIQAGDKAQHLFPAGEPVGVLAATS 354
            GTLFKNLMAILRDVVICYD TVRNVCSNSIIQFEYG++A  K QH FPAGEPVGVLAAT+
Sbjct: 780  GTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATA 839

Query: 353  MSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPIDRRVILYLNDCDCGRSYCREKA 174
            MSNPAYKAVLD+SPSSNSSWE MKEILLC+VNF+N+ IDRRVILYLNDCDCGR YCRE A
Sbjct: 840  MSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENA 899

Query: 173  ACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTE-DAGLVGHIHLNELMLEELKIDM 3
            A LVKNQL+K SLKDTAV+F++EY +Q     S+E   GLVGHIHLN+L+L++L + M
Sbjct: 900  AYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSM 957