BLASTX nr result

ID: Glycyrrhiza24_contig00029365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029365
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003587239.1| succinate dehydrogenase subunit 4 [Citrullus...   170   1e-40
dbj|BAD83522.2| hypothetical protein (mitochondrion) [Nicotiana ...   166   1e-39
ref|YP_002608211.1| succinate dehydrogenase subunit 4 [Carica pa...   166   2e-39
ref|YP_173457.1| hypothetical protein NitaMp119 [Nicotiana tabacum]   166   2e-39
gb|AAK77856.1|AF362737_1 succinate dehydrogenase subunit 4 [Gymn...   165   4e-39

>ref|YP_003587239.1| succinate dehydrogenase subunit 4 [Citrullus lanatus]
           gi|259156796|gb|ACV96658.1| succinate dehydrogenase
           subunit 4 [Citrullus lanatus]
          Length = 135

 Score =  170 bits (431), Expect = 1e-40
 Identities = 86/95 (90%), Positives = 88/95 (92%)
 Frame = +2

Query: 2   RYMKERNSGLRN*SSNTKRTGLFQRITAAFPLPLILIYKKVSSTFLLNLSLFWHINEGIE 181
           RYMKERNSGLRN SS TKRTGLFQRITAAFPLP I+IYKKVSSTFL NLSLFWHINEGIE
Sbjct: 22  RYMKERNSGLRNESSKTKRTGLFQRITAAFPLPFIIIYKKVSSTFLPNLSLFWHINEGIE 81

Query: 182 EIMA*YVHQEMTRNWILVYFRLFFLIVIKDVFLSL 286
           EIMA +VHQEMTRNWILVY RLF LIVIKDVFLSL
Sbjct: 82  EIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLSL 116


>dbj|BAD83522.2| hypothetical protein (mitochondrion) [Nicotiana tabacum]
          Length = 125

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/95 (90%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   RYMKERNSGLRN*SSNTKRTGLFQRITAAFPLPLILIYKKVSSTFLLNLSLFWHINEGIE 181
           RYMKE  SGLRN SS TKRTGLFQRITAAF LPLI+IYKKVSSTFLLNLSLFWHINEGIE
Sbjct: 22  RYMKEGISGLRNESSKTKRTGLFQRITAAFLLPLIIIYKKVSSTFLLNLSLFWHINEGIE 81

Query: 182 EIMA*YVHQEMTRNWILVYFRLFFLIVIKDVFLSL 286
           EIMA YVHQEMTRNWILVY RLF LIVIKDVFLSL
Sbjct: 82  EIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLSL 116


>ref|YP_002608211.1| succinate dehydrogenase subunit 4 [Carica papaya]
           gi|170522390|gb|ACB20500.1| succinate dehydrogenase
           subunit 4, partial (mitochondrion) [Carica papaya]
          Length = 136

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/95 (88%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   RYMKERNSGLRN*SSNTKRTGLFQRITAAFPLPLILIYKKVSSTFLLNLSLFWHINEGIE 181
           RYMKER SGL+N SS TKR GLFQRITAAFPLPLI+IYKKVSSTFL NLSLFWHINEGIE
Sbjct: 22  RYMKERKSGLKNESSKTKRIGLFQRITAAFPLPLIIIYKKVSSTFLPNLSLFWHINEGIE 81

Query: 182 EIMA*YVHQEMTRNWILVYFRLFFLIVIKDVFLSL 286
           EIMA +VHQEMTRNWILVY RLF LIVIKDVFLSL
Sbjct: 82  EIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLSL 116


>ref|YP_173457.1| hypothetical protein NitaMp119 [Nicotiana tabacum]
          Length = 125

 Score =  166 bits (419), Expect = 2e-39
 Identities = 85/95 (89%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   RYMKERNSGLRN*SSNTKRTGLFQRITAAFPLPLILIYKKVSSTFLLNLSLFWHINEGIE 181
           RYMKE  SGLRN SS TKRTGLFQRITAAFPLPLI+IYKKVSSTFL NLSLFWHINEGIE
Sbjct: 22  RYMKEGISGLRNESSKTKRTGLFQRITAAFPLPLIIIYKKVSSTFLPNLSLFWHINEGIE 81

Query: 182 EIMA*YVHQEMTRNWILVYFRLFFLIVIKDVFLSL 286
           EIMA +VHQEMTRNWILVY RLF LIVIKDVFLSL
Sbjct: 82  EIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLSL 116


>gb|AAK77856.1|AF362737_1 succinate dehydrogenase subunit 4 [Gymnocladus dioicus]
          Length = 100

 Score =  165 bits (417), Expect = 4e-39
 Identities = 85/93 (91%), Positives = 87/93 (93%)
 Frame = +2

Query: 8   MKERNSGLRN*SSNTKRTGLFQRITAAFPLPLILIYKKVSSTFLLNLSLFWHINEGIEEI 187
           MKERNSGLRN SS TKRTGLF+RITAAFPLPLI+IYKKVSSTFL NLSLFWHINEGIEEI
Sbjct: 1   MKERNSGLRNESSKTKRTGLFKRITAAFPLPLIIIYKKVSSTFLPNLSLFWHINEGIEEI 60

Query: 188 MA*YVHQEMTRNWILVYFRLFFLIVIKDVFLSL 286
           MA YVHQEMTRN ILVY RLFFLIVIKDVFLSL
Sbjct: 61  MADYVHQEMTRNLILVYLRLFFLIVIKDVFLSL 93


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