BLASTX nr result

ID: Glycyrrhiza24_contig00029360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029360
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612113.1| Transmembrane and coiled-coil domain-contain...   114   6e-24
ref|XP_003612112.1| Transmembrane and coiled-coil domain-contain...   114   6e-24
ref|XP_003517195.1| PREDICTED: uncharacterized membrane protein ...   109   3e-22
ref|XP_004146487.1| PREDICTED: transmembrane and coiled-coil dom...   100   1e-19
ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil dom...    99   3e-19

>ref|XP_003612113.1| Transmembrane and coiled-coil domain-containing protein [Medicago
           truncatula] gi|355513448|gb|AES95071.1| Transmembrane
           and coiled-coil domain-containing protein [Medicago
           truncatula]
          Length = 447

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/81 (74%), Positives = 65/81 (80%)
 Frame = -1

Query: 249 SYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLXXXXXXXXXXXXSATGAAVSEDPNLWVH 70
           SYLTPTQRYAAGAL GLA+HQAQLHQTHPLGL            ++TG AV EDP+LWVH
Sbjct: 14  SYLTPTQRYAAGALFGLALHQAQLHQTHPLGL-STDDFPSPSSSTSTG-AVFEDPDLWVH 71

Query: 69  HSSGLLRPVFIFLGIDSAAWS 7
           H+SGLLRPVFIFL IDSAAWS
Sbjct: 72  HTSGLLRPVFIFLDIDSAAWS 92


>ref|XP_003612112.1| Transmembrane and coiled-coil domain-containing protein [Medicago
           truncatula] gi|355513447|gb|AES95070.1| Transmembrane
           and coiled-coil domain-containing protein [Medicago
           truncatula]
          Length = 717

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/81 (74%), Positives = 65/81 (80%)
 Frame = -1

Query: 249 SYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLXXXXXXXXXXXXSATGAAVSEDPNLWVH 70
           SYLTPTQRYAAGAL GLA+HQAQLHQTHPLGL            ++TG AV EDP+LWVH
Sbjct: 14  SYLTPTQRYAAGALFGLALHQAQLHQTHPLGL-STDDFPSPSSSTSTG-AVFEDPDLWVH 71

Query: 69  HSSGLLRPVFIFLGIDSAAWS 7
           H+SGLLRPVFIFL IDSAAWS
Sbjct: 72  HTSGLLRPVFIFLDIDSAAWS 92


>ref|XP_003517195.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
           max]
          Length = 667

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/85 (67%), Positives = 64/85 (75%)
 Frame = -1

Query: 261 AATTSYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLXXXXXXXXXXXXSATGAAVSEDPN 82
           AA TSYLT TQRYAAGAL GLA+HQAQLHQTHPLGL            +++  AVSE PN
Sbjct: 2   AAATSYLTGTQRYAAGALFGLALHQAQLHQTHPLGL--STDDFPSDSETSSTLAVSEHPN 59

Query: 81  LWVHHSSGLLRPVFIFLGIDSAAWS 7
           LWVHH+SGLLRPV  +L I+SAAWS
Sbjct: 60  LWVHHNSGLLRPVLKYLDINSAAWS 84


>ref|XP_004146487.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4-like [Cucumis sativus]
          Length = 673

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/87 (60%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
 Frame = -1

Query: 252 TSYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLXXXXXXXXXXXXSATGAA---VSEDPN 82
           TS+L PTQRYA GAL  LA+HQAQ+HQT PLG             S +G++   VSEDP 
Sbjct: 17  TSFLAPTQRYATGALFALALHQAQIHQTRPLGFSDDDARAEERTSSCSGSSSDSVSEDPE 76

Query: 81  LWVHHSSGLLRPVFIFLGIDSAAWSHM 1
           LWVH SS LLRPVF FL IDSAAWS M
Sbjct: 77  LWVHESSALLRPVFRFLEIDSAAWSGM 103


>ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4-like [Cucumis sativus]
          Length = 673

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/85 (61%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
 Frame = -1

Query: 252 TSYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLXXXXXXXXXXXXSATGAA---VSEDPN 82
           TS+L PTQRYA GAL  LA+HQAQ+HQT PLG             S +G++   VSEDP 
Sbjct: 17  TSFLAPTQRYATGALFALALHQAQIHQTRPLGFSDDDARAEERTSSCSGSSSDSVSEDPE 76

Query: 81  LWVHHSSGLLRPVFIFLGIDSAAWS 7
           LWVH SS LLRPVF FL IDSAAWS
Sbjct: 77  LWVHESSALLRPVFRFLEIDSAAWS 101


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