BLASTX nr result

ID: Glycyrrhiza24_contig00029351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029351
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547649.1| PREDICTED: F-box/kelch-repeat protein At3g27...   254   1e-65
ref|XP_003553251.1| PREDICTED: F-box/kelch-repeat protein At3g27...   228   6e-58
ref|XP_003525748.1| PREDICTED: F-box/kelch-repeat protein At3g27...   176   4e-42
ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27...   136   4e-30
emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]   133   3e-29

>ref|XP_003547649.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 404

 Score =  254 bits (648), Expect = 1e-65
 Identities = 125/159 (78%), Positives = 137/159 (86%), Gaps = 1/159 (0%)
 Frame = -3

Query: 475 MTNKRTLPIPNFGSGFFLGYHNNSSPSQKMRIIELSPSDGNGSSS-ADEPLPQDADYSNV 299
           MTN++ LP+P+F SG    YH   S  +KMR+ ELSPSDGNGSS+  DEPLPQDADYSNV
Sbjct: 1   MTNRKALPVPSFVSGICFSYH---SSQKKMRVRELSPSDGNGSSTNGDEPLPQDADYSNV 57

Query: 298 LQSLSDELETLILARFPRSQHWKLCFLNKRFLALTKSGEIYKIRRELGLKEPSVFMLTSG 119
           L SLSDELET ILARFPRSQHWKLCFLNKRFLAL +SGEIYKIRREL  KEPSVFML SG
Sbjct: 58  L-SLSDELETSILARFPRSQHWKLCFLNKRFLALARSGEIYKIRRELRFKEPSVFMLASG 116

Query: 118 ENNWWGMDWPFNSIRKLPPIQSDYNFEFGDKESFTAGSH 2
           E+NWWGM+WPFNS +KLPPIQSDYNFE+GDKESF AGSH
Sbjct: 117 ESNWWGMEWPFNSSKKLPPIQSDYNFEYGDKESFCAGSH 155


>ref|XP_003553251.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 375

 Score =  228 bits (582), Expect = 6e-58
 Identities = 112/130 (86%), Positives = 119/130 (91%), Gaps = 1/130 (0%)
 Frame = -3

Query: 388 MRIIELSPSDGNGSSS-ADEPLPQDADYSNVLQSLSDELETLILARFPRSQHWKLCFLNK 212
           MR+ ELSPSDGNGSS+  DEPLPQDADY NVL SLSDELET ILARFPRSQHWKLCFLNK
Sbjct: 1   MRVRELSPSDGNGSSTNEDEPLPQDADYINVL-SLSDELETSILARFPRSQHWKLCFLNK 59

Query: 211 RFLALTKSGEIYKIRRELGLKEPSVFMLTSGENNWWGMDWPFNSIRKLPPIQSDYNFEFG 32
           RFLAL++SGEIYKIRRELG KEPSVFML SGE+NWWGM+WPF S +KLPPIQSDYNFEFG
Sbjct: 60  RFLALSRSGEIYKIRRELGFKEPSVFMLVSGESNWWGMEWPFMSSKKLPPIQSDYNFEFG 119

Query: 31  DKESFTAGSH 2
           DKESF AGSH
Sbjct: 120 DKESFCAGSH 129


>ref|XP_003525748.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 394

 Score =  176 bits (446), Expect = 4e-42
 Identities = 94/148 (63%), Positives = 111/148 (75%)
 Frame = -3

Query: 445 NFGSGFFLGYHNNSSPSQKMRIIELSPSDGNGSSSADEPLPQDADYSNVLQSLSDELETL 266
           NFG G     HN+S+  +KMRI+E SPS  +GSSSA +  PQDADY   +  LSDELET+
Sbjct: 3   NFGGGSCRFSHNSSA--EKMRILEESPSYAHGSSSAGQE-PQDADYD--VPCLSDELETM 57

Query: 265 ILARFPRSQHWKLCFLNKRFLALTKSGEIYKIRRELGLKEPSVFMLTSGENNWWGMDWPF 86
           ILARFP  +HWK+C L+KRFL L KSGEIYKIRR +G KEPSVFML SGE NW   D  F
Sbjct: 58  ILARFPIPKHWKMCCLSKRFLTLLKSGEIYKIRRVIGFKEPSVFMLASGEKNWCAFDGHF 117

Query: 85  NSIRKLPPIQSDYNFEFGDKESFTAGSH 2
            S RKLP I SDYNFE+G+KESF+AG++
Sbjct: 118 RSCRKLPIIPSDYNFEWGNKESFSAGTY 145


>ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Vitis
           vinifera]
          Length = 437

 Score =  136 bits (342), Expect = 4e-30
 Identities = 82/171 (47%), Positives = 109/171 (63%), Gaps = 12/171 (7%)
 Frame = -3

Query: 478 SMTNKRTLPIPNFGSGFFLGYHNNSSPSQKMR----IIELSPSDGN--------GSSSAD 335
           ++ N+R +   + G+G +    ++S P +K+R    +  L PS           GSSSA 
Sbjct: 23  NVRNRRGVLDGDSGNGCWAS--SSSPPPEKIRARGTVRRLDPSRNGFSSGECRVGSSSAV 80

Query: 334 EPLPQDADYSNVLQSLSDELETLILARFPRSQHWKLCFLNKRFLALTKSGEIYKIRRELG 155
           +   QDADYS+   SLS E+E LILAR PRS++WK CF+NKR+L L KSGE++KIRRE+G
Sbjct: 81  DT--QDADYSDG-PSLSYEVEGLILARVPRSEYWKFCFVNKRYLTLLKSGELFKIRREIG 137

Query: 154 LKEPSVFMLTSGENNWWGMDWPFNSIRKLPPIQSDYNFEFGDKESFTAGSH 2
           +KE SVFML SGE +WW  D  F S R+LP + SD  F   DKES  AG+H
Sbjct: 138 VKESSVFMLASGETSWWAFDRQFESRRRLPILPSDPCFTSADKESVCAGTH 188


>emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]
          Length = 514

 Score =  133 bits (335), Expect = 3e-29
 Identities = 81/168 (48%), Positives = 106/168 (63%), Gaps = 12/168 (7%)
 Frame = -3

Query: 469 NKRTLPIPNFGSGFFLGYHNNSSPSQKMR----IIELSPSDGN--------GSSSADEPL 326
           N+R +   + G+G +    ++S P +K+R    +  L PS           GSSSA +  
Sbjct: 103 NRRGVLDGDSGNGCWAS--SSSPPPEKIRARGTVRRLDPSRNGFSSGECRVGSSSAVDT- 159

Query: 325 PQDADYSNVLQSLSDELETLILARFPRSQHWKLCFLNKRFLALTKSGEIYKIRRELGLKE 146
            QDADYS+   SLS E+E LILAR PRS++WK CF+NKR+L L KSGE++KIRRE+G+KE
Sbjct: 160 -QDADYSDG-PSLSYEVEGLILARVPRSEYWKFCFVNKRYLTLLKSGELFKIRREIGVKE 217

Query: 145 PSVFMLTSGENNWWGMDWPFNSIRKLPPIQSDYNFEFGDKESFTAGSH 2
            SVFML SGE +WW  D  F   R+LP + SD  F   DKES  AG+H
Sbjct: 218 SSVFMLASGETSWWAFDRQFEYRRRLPILPSDPCFTSADKESVCAGTH 265


Top