BLASTX nr result

ID: Glycyrrhiza24_contig00029350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029350
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containin...   315   3e-84
ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containin...   305   3e-81
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu...   301   8e-80
ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containin...   299   3e-79
ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216...   299   3e-79

>ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Glycine max]
          Length = 587

 Score =  315 bits (808), Expect = 3e-84
 Identities = 154/209 (73%), Positives = 167/209 (79%), Gaps = 2/209 (0%)
 Frame = +2

Query: 5   PNHNLSQEHGDGSDDDNRPTSNPFPPESLSLAHTNSESATLENVAQQVPNFGTEQDKAHC 184
           P  N + ++    ++DN+PTSNP PPESL          TLENVAQQ+PNFGTEQDKAHC
Sbjct: 127 PKPNETNQNDHQQEEDNKPTSNPLPPESL----------TLENVAQQIPNFGTEQDKAHC 176

Query: 185 PFHLKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQD--EGLXXXXXXXXXXX 358
           PFHLKTGACRFG RCSRVHFYPDKS TLLIKNMY+GPGLA +QD  EGL           
Sbjct: 177 PFHLKTGACRFGIRCSRVHFYPDKSSTLLIKNMYSGPGLACDQDQDEGLEYTDEEVERCF 236

Query: 359 XXXXXXXHTEFLKFGEIVNFKVCKNGSFHLRGNVYIQYKSLDSALLAYNSVNGRYFAGKQ 538
                  HTEFLKFGEIVNFKVCKNGSFHLRGNVY+QYKSLDSALLAYN+VNGRYFAGKQ
Sbjct: 237 EEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNTVNGRYFAGKQ 296

Query: 539 VSCKFVNLTRWKVAICGEYMKSGYKTCSH 625
           VSC+FVNLTRWKVAICGEYMKSG+KTCSH
Sbjct: 297 VSCQFVNLTRWKVAICGEYMKSGFKTCSH 325


>ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Glycine max]
          Length = 518

 Score =  305 bits (782), Expect = 3e-81
 Identities = 149/195 (76%), Positives = 157/195 (80%), Gaps = 2/195 (1%)
 Frame = +2

Query: 47  DDNRPTSNPFPPESLSLAHTNSESATLENVAQQVPNFGTEQDKAHCPFHLKTGACRFGQR 226
           +DNRPTSNP PP+S           TLENVAQQ+PNFGTEQDKAHCPFHLKTGAC FG R
Sbjct: 153 EDNRPTSNPLPPDS-----------TLENVAQQIPNFGTEQDKAHCPFHLKTGACCFGIR 201

Query: 227 CSRVHFYPDKSCTLLIKNMYNGPGLAWE--QDEGLXXXXXXXXXXXXXXXXXXHTEFLKF 400
           CSRVHFYPDKS T LIKNMYNGPGLA +  QDEGL                  HTEFLKF
Sbjct: 202 CSRVHFYPDKSSTFLIKNMYNGPGLACDRDQDEGLEYKDEEVERCFEEFYEDVHTEFLKF 261

Query: 401 GEIVNFKVCKNGSFHLRGNVYIQYKSLDSALLAYNSVNGRYFAGKQVSCKFVNLTRWKVA 580
           GE+VNFKVCKNGSFH RGNVY+QYKSLDSALLAYNSVNGRYFAGKQVSC+FVNLTRWKVA
Sbjct: 262 GEVVNFKVCKNGSFHWRGNVYVQYKSLDSALLAYNSVNGRYFAGKQVSCQFVNLTRWKVA 321

Query: 581 ICGEYMKSGYKTCSH 625
           ICGEYMKSG+KTCSH
Sbjct: 322 ICGEYMKSGFKTCSH 336


>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 857

 Score =  301 bits (770), Expect = 8e-80
 Identities = 143/198 (72%), Positives = 159/198 (80%), Gaps = 5/198 (2%)
 Frame = +2

Query: 44  DDDNRPTSNPFPPESLSLAHTN-----SESATLENVAQQVPNFGTEQDKAHCPFHLKTGA 208
           ++D+RPTSNP PP+S + A        S    LENVAQQ+PNFGTEQDKAHCPFHLKTGA
Sbjct: 170 NEDDRPTSNPLPPQSEAFAEYQKAPMPSAERMLENVAQQIPNFGTEQDKAHCPFHLKTGA 229

Query: 209 CRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLXXXXXXXXXXXXXXXXXXHTE 388
           CRFGQRCSRVHFYPDK+ TLL+KNMYNGPGLAWEQDEGL                  HTE
Sbjct: 230 CRFGQRCSRVHFYPDKANTLLMKNMYNGPGLAWEQDEGLEHTDEEVERSYEEFYEDVHTE 289

Query: 389 FLKFGEIVNFKVCKNGSFHLRGNVYIQYKSLDSALLAYNSVNGRYFAGKQVSCKFVNLTR 568
           FLK+GEIVNFKVCKN SFHLRGNVY+QYKSLDSA+LAY S+NGRYFAGKQV+C+FVN+TR
Sbjct: 290 FLKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYCSINGRYFAGKQVNCEFVNVTR 349

Query: 569 WKVAICGEYMKSGYKTCS 622
           WKVAICGEYMKS  + CS
Sbjct: 350 WKVAICGEYMKSRLQMCS 367


>ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Cucumis sativus]
          Length = 838

 Score =  299 bits (765), Expect = 3e-79
 Identities = 136/198 (68%), Positives = 163/198 (82%), Gaps = 4/198 (2%)
 Frame = +2

Query: 44  DDDNRPTSNPFPPESLSLA-HTNSESAT---LENVAQQVPNFGTEQDKAHCPFHLKTGAC 211
           +D +RPTSNP PP+S +   + N+  +T   +E+VA QVPNFGTEQDK+HCPFHLKTGAC
Sbjct: 171 EDAHRPTSNPLPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGAC 230

Query: 212 RFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLXXXXXXXXXXXXXXXXXXHTEF 391
           RFGQRCSR+HFYP+KSCTLLIKNMYNGPGLAWEQDEGL                  HTEF
Sbjct: 231 RFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLEFTDEEVERCYEEFYDDVHTEF 290

Query: 392 LKFGEIVNFKVCKNGSFHLRGNVYIQYKSLDSALLAYNSVNGRYFAGKQVSCKFVNLTRW 571
           LK+GEIVNFKVCKNGSFHLRGN+Y+ YKS+DSA+LAYN+ NGR++AGKQ+ C+F+N+TRW
Sbjct: 291 LKYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNANNGRFYAGKQIICEFINVTRW 350

Query: 572 KVAICGEYMKSGYKTCSH 625
           K+AICGE+MK+ YKTCSH
Sbjct: 351 KIAICGEFMKTRYKTCSH 368


>ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
          Length = 867

 Score =  299 bits (765), Expect = 3e-79
 Identities = 136/198 (68%), Positives = 163/198 (82%), Gaps = 4/198 (2%)
 Frame = +2

Query: 44  DDDNRPTSNPFPPESLSLA-HTNSESAT---LENVAQQVPNFGTEQDKAHCPFHLKTGAC 211
           +D +RPTSNP PP+S +   + N+  +T   +E+VA QVPNFGTEQDK+HCPFHLKTGAC
Sbjct: 171 EDAHRPTSNPLPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGAC 230

Query: 212 RFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLXXXXXXXXXXXXXXXXXXHTEF 391
           RFGQRCSR+HFYP+KSCTLLIKNMYNGPGLAWEQDEGL                  HTEF
Sbjct: 231 RFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLEFTDEEVERCYEEFYDDVHTEF 290

Query: 392 LKFGEIVNFKVCKNGSFHLRGNVYIQYKSLDSALLAYNSVNGRYFAGKQVSCKFVNLTRW 571
           LK+GEIVNFKVCKNGSFHLRGN+Y+ YKS+DSA+LAYN+ NGR++AGKQ+ C+F+N+TRW
Sbjct: 291 LKYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNANNGRFYAGKQIICEFINVTRW 350

Query: 572 KVAICGEYMKSGYKTCSH 625
           K+AICGE+MK+ YKTCSH
Sbjct: 351 KIAICGEFMKTRYKTCSH 368


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