BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029345
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containi...   185   4e-45
ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
gb|AAB61077.1| similar to N. tabacum membrane-associated salt-in...    77   1e-12
ref|NP_198079.1| pentatricopeptide repeat-containing protein [Ar...    77   1e-12

>ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Glycine max]
          Length = 1079

 Score =  185 bits (469), Expect = 4e-45
 Identities = 96/136 (70%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   NQMVKNESVKYYKFFQTFYWVLCEHKEDAQSDDKLVAIEPIDKLDTTALGMMLSLYLTND 180
           NQMVK E  K  KFF TFYW+LCEHK D +SDD+LVAIEPIDK + TALG+MLSLYL N 
Sbjct: 569 NQMVKTEYFKNDKFFMTFYWILCEHKGDMESDDELVAIEPIDKFNATALGLMLSLYLANG 628

Query: 181 NXXXXXXXXXXXXGYA-GGSKIVSQFIISLTKDGEISKAESLNYQLIMLGCRMEEATVAS 357
           N            GYA GGSKIVSQ II+L+K+GEISKAE LN+QL  LGCRM+EATVAS
Sbjct: 629 NFNKTKILLKLLLGYAAGGSKIVSQLIINLSKEGEISKAELLNHQLTKLGCRMDEATVAS 688

Query: 358 LISHYGKQHMLKQAED 405
           LISHYGKQ MLKQAED
Sbjct: 689 LISHYGKQQMLKQAED 704


>ref|XP_002325381.1| predicted protein [Populus trichocarpa] gi|222862256|gb|EEE99762.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 53/134 (39%), Positives = 82/134 (61%)
 Frame = +1

Query: 4   QMVKNESVKYYKFFQTFYWVLCEHKEDAQSDDKLVAIEPIDKLDTTALGMMLSLYLTNDN 183
           +M  N S K  +FF+TF  V+  + E+ + ++ +V+       DTTALG++LSLYL N N
Sbjct: 561 EMGTNASFKDNRFFKTFSNVM--YGENKELENIMVSA------DTTALGLILSLYLENGN 612

Query: 184 XXXXXXXXXXXXGYAGGSKIVSQFIISLTKDGEISKAESLNYQLIMLGCRMEEATVASLI 363
                           G  +VSQ + S  ++G++ KAE++N QLI LG ++E+ T+ASLI
Sbjct: 613 FTKTEEFLKLILEAGSGLSVVSQLVNSFIREGDLFKAEAVNGQLIKLGSKLEDETIASLI 672

Query: 364 SHYGKQHMLKQAED 405
           S YG+Q+ LKQA++
Sbjct: 673 SAYGRQNKLKQAQE 686


>ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Vitis vinifera]
          Length = 1071

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 50/132 (37%), Positives = 73/132 (55%)
 Frame = +1

Query: 4   QMVKNESVKYYKFFQTFYWVLCEHKEDAQSDDKLVAIEPIDKLDTTALGMMLSLYLTNDN 183
           +M  N   K  +F QT   V+  H+E  + D     +E +++ +T AL +ML LY    N
Sbjct: 566 EMGTNGLFKDSEFIQTLSLVM--HEESERPDYVDDTVEALNQNNTLALELMLGLYSEVGN 623

Query: 184 XXXXXXXXXXXXGYAGGSKIVSQFIISLTKDGEISKAESLNYQLIMLGCRMEEATVASLI 363
                         AGG  + S  I   T++G+ISKA++LN QL+ LG   E+A++ASLI
Sbjct: 624 ACKVEEILKMLLKTAGGLSVASHLISKFTREGDISKAQNLNDQLVKLGRGAEDASIASLI 683

Query: 364 SHYGKQHMLKQA 399
           + YGKQH LK+A
Sbjct: 684 TLYGKQHKLKKA 695


>gb|AAB61077.1| similar to N. tabacum membrane-associated salt-inducible protein
           (PID:g473874) [Arabidopsis thaliana]
          Length = 934

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 49/133 (36%), Positives = 71/133 (53%)
 Frame = +1

Query: 4   QMVKNESVKYYKFFQTFYWVLCEHKEDAQSDDKLVAIEPIDKLDTTALGMMLSLYLTNDN 183
           +M +   VK  +F QT    L E        DK  A+  + +LD  ALG+ML+L L   N
Sbjct: 553 KMGREARVKDNRFVQT----LAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGN 608

Query: 184 XXXXXXXXXXXXGYAGGSKIVSQFIISLTKDGEISKAESLNYQLIMLGCRMEEATVASLI 363
                           GS  V++ I S  ++G++SKAE +   +I LG RMEE T+A+LI
Sbjct: 609 LNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLI 668

Query: 364 SHYGKQHMLKQAE 402
           + YG+QH LK+A+
Sbjct: 669 AVYGRQHKLKEAK 681


>ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635757|sp|O04647.2|PP399_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
           gi|332006282|gb|AED93665.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1038

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 49/133 (36%), Positives = 71/133 (53%)
 Frame = +1

Query: 4   QMVKNESVKYYKFFQTFYWVLCEHKEDAQSDDKLVAIEPIDKLDTTALGMMLSLYLTNDN 183
           +M +   VK  +F QT    L E        DK  A+  + +LD  ALG+ML+L L   N
Sbjct: 562 KMGREARVKDNRFVQT----LAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGN 617

Query: 184 XXXXXXXXXXXXGYAGGSKIVSQFIISLTKDGEISKAESLNYQLIMLGCRMEEATVASLI 363
                           GS  V++ I S  ++G++SKAE +   +I LG RMEE T+A+LI
Sbjct: 618 LNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLI 677

Query: 364 SHYGKQHMLKQAE 402
           + YG+QH LK+A+
Sbjct: 678 AVYGRQHKLKEAK 690