BLASTX nr result
ID: Glycyrrhiza24_contig00029344
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00029344 (341 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [... 75 5e-12 ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containin... 66 3e-09 ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containin... 62 6e-08 ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 57 2e-06 ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containin... 57 2e-06 >ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355512291|gb|AES93914.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 685 Score = 75.1 bits (183), Expect = 5e-12 Identities = 49/106 (46%), Positives = 55/106 (51%), Gaps = 6/106 (5%) Frame = +2 Query: 2 ELVRLACTPDPVLHNLVLRVKTHLGXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFSK 181 ELVRLAC PD VLHNL +RVKTHLG NPI R+T +S NPFSK Sbjct: 37 ELVRLACCPDHVLHNLAIRVKTHLG------MNLSTPSSPSPLNPIGRIT-SSSNNPFSK 89 Query: 182 SSPRGSTNGFDFXXXXXXXXXXXXXXXXF------QKLSPLLPYDN 301 SSPRGS NGFDF F K +PL+ Y+N Sbjct: 90 SSPRGS-NGFDFNRNPSSPSGNVWSQPSFPKNPISPKFNPLMSYEN 134 >ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like [Glycine max] Length = 658 Score = 66.2 bits (160), Expect = 3e-09 Identities = 46/108 (42%), Positives = 51/108 (47%), Gaps = 8/108 (7%) Frame = +2 Query: 2 ELVRLACTPDPVLHNLVLRVKTHL-GXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFS 178 EL+RLAC+PDPVLH LVLRVK HL G NP ARLT S+NPFS Sbjct: 37 ELIRLACSPDPVLHTLVLRVKNHLSGLTLSSTTPSSPSLPPSPLNPTARLT-AISSNPFS 95 Query: 179 KSSPRGSTNGFDFXXXXXXXXXXXXXXXXF-------QKLSPLLPYDN 301 + G TNGFDF F K +PL YDN Sbjct: 96 RGG--GPTNGFDFTRNHPSSPSSHSHAWNFPNNNPISPKSTPLFSYDN 141 >ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like [Glycine max] Length = 646 Score = 61.6 bits (148), Expect = 6e-08 Identities = 44/106 (41%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Frame = +2 Query: 2 ELVRLACTPDPVLHNLVLRVKTHLGXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFSK 181 EL+R+AC+PD VL LVLRVK+HLG NPIARLT S+NPFS+ Sbjct: 37 ELIRVACSPDTVLQTLVLRVKSHLG-LTLSTPSSPSQFPPSPLNPIARLT-GTSSNPFSR 94 Query: 182 SSPRGSTNGFDF------XXXXXXXXXXXXXXXXFQKLSPLLPYDN 301 P TNGFDF K +PLL YDN Sbjct: 95 GGP---TNGFDFTRNPASPSSHSHAWNFPNNNPISPKSTPLLSYDN 137 >ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 46-like [Cucumis sativus] Length = 675 Score = 56.6 bits (135), Expect = 2e-06 Identities = 32/71 (45%), Positives = 42/71 (59%) Frame = +2 Query: 2 ELVRLACTPDPVLHNLVLRVKTHLGXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFSK 181 EL+RLA P+ +LH+L+L+ K HLG NPIAR P+++NPFS+ Sbjct: 38 ELIRLAFGPETLLHSLILKAKAHLG--FPLNSSSSTPSSPSPLNPIAR---PSNSNPFSQ 92 Query: 182 SSPRGSTNGFD 214 SSPR NGFD Sbjct: 93 SSPRIPNNGFD 103 >ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like [Cucumis sativus] Length = 675 Score = 56.6 bits (135), Expect = 2e-06 Identities = 32/71 (45%), Positives = 42/71 (59%) Frame = +2 Query: 2 ELVRLACTPDPVLHNLVLRVKTHLGXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFSK 181 EL+RLA P+ +LH+L+L+ K HLG NPIAR P+++NPFS+ Sbjct: 38 ELIRLAFGPETLLHSLILKAKAHLG--FPLNSSSSTPSSPSPLNPIAR---PSNSNPFSQ 92 Query: 182 SSPRGSTNGFD 214 SSPR NGFD Sbjct: 93 SSPRIPNNGFD 103