BLASTX nr result

ID: Glycyrrhiza24_contig00029344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029344
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [...    75   5e-12
ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containin...    66   3e-09
ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containin...    62   6e-08
ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    57   2e-06
ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containin...    57   2e-06

>ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355512291|gb|AES93914.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 685

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 49/106 (46%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
 Frame = +2

Query: 2   ELVRLACTPDPVLHNLVLRVKTHLGXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFSK 181
           ELVRLAC PD VLHNL +RVKTHLG                  NPI R+T  +S NPFSK
Sbjct: 37  ELVRLACCPDHVLHNLAIRVKTHLG------MNLSTPSSPSPLNPIGRIT-SSSNNPFSK 89

Query: 182 SSPRGSTNGFDFXXXXXXXXXXXXXXXXF------QKLSPLLPYDN 301
           SSPRGS NGFDF                F       K +PL+ Y+N
Sbjct: 90  SSPRGS-NGFDFNRNPSSPSGNVWSQPSFPKNPISPKFNPLMSYEN 134


>ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
           [Glycine max]
          Length = 658

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/108 (42%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
 Frame = +2

Query: 2   ELVRLACTPDPVLHNLVLRVKTHL-GXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFS 178
           EL+RLAC+PDPVLH LVLRVK HL G                  NP ARLT   S+NPFS
Sbjct: 37  ELIRLACSPDPVLHTLVLRVKNHLSGLTLSSTTPSSPSLPPSPLNPTARLT-AISSNPFS 95

Query: 179 KSSPRGSTNGFDFXXXXXXXXXXXXXXXXF-------QKLSPLLPYDN 301
           +    G TNGFDF                F        K +PL  YDN
Sbjct: 96  RGG--GPTNGFDFTRNHPSSPSSHSHAWNFPNNNPISPKSTPLFSYDN 141


>ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
           [Glycine max]
          Length = 646

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 44/106 (41%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
 Frame = +2

Query: 2   ELVRLACTPDPVLHNLVLRVKTHLGXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFSK 181
           EL+R+AC+PD VL  LVLRVK+HLG                  NPIARLT   S+NPFS+
Sbjct: 37  ELIRVACSPDTVLQTLVLRVKSHLG-LTLSTPSSPSQFPPSPLNPIARLT-GTSSNPFSR 94

Query: 182 SSPRGSTNGFDF------XXXXXXXXXXXXXXXXFQKLSPLLPYDN 301
             P   TNGFDF                        K +PLL YDN
Sbjct: 95  GGP---TNGFDFTRNPASPSSHSHAWNFPNNNPISPKSTPLLSYDN 137


>ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 46-like [Cucumis sativus]
          Length = 675

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/71 (45%), Positives = 42/71 (59%)
 Frame = +2

Query: 2   ELVRLACTPDPVLHNLVLRVKTHLGXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFSK 181
           EL+RLA  P+ +LH+L+L+ K HLG                  NPIAR   P+++NPFS+
Sbjct: 38  ELIRLAFGPETLLHSLILKAKAHLG--FPLNSSSSTPSSPSPLNPIAR---PSNSNPFSQ 92

Query: 182 SSPRGSTNGFD 214
           SSPR   NGFD
Sbjct: 93  SSPRIPNNGFD 103


>ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
           [Cucumis sativus]
          Length = 675

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/71 (45%), Positives = 42/71 (59%)
 Frame = +2

Query: 2   ELVRLACTPDPVLHNLVLRVKTHLGXXXXXXXXXXXXXXXXXXNPIARLTPPNSTNPFSK 181
           EL+RLA  P+ +LH+L+L+ K HLG                  NPIAR   P+++NPFS+
Sbjct: 38  ELIRLAFGPETLLHSLILKAKAHLG--FPLNSSSSTPSSPSPLNPIAR---PSNSNPFSQ 92

Query: 182 SSPRGSTNGFD 214
           SSPR   NGFD
Sbjct: 93  SSPRIPNNGFD 103


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