BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029305
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ...   106   2e-21
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515122|gb|AES96745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/100 (58%), Positives = 65/100 (65%)
 Frame = -2

Query: 303 MAAPILQLTSLPPTKPNNNTETIPKHEATTTXXXXXXXXXXXXXLIPKCTTLRELKQIQA 124
           M APILQLTS   TKPN  T ++                     LIPKCTTL+ELKQIQA
Sbjct: 1   MDAPILQLTSFSLTKPNTETTSL-------------LPLPHLISLIPKCTTLKELKQIQA 47

Query: 123 YTIKTHLHNDTKVLTKLINFCASNPTRASMEHARHLFDQI 4
           YTIKT+  N+T V+TK INFC SNPT+ASMEHA  LFDQI
Sbjct: 48  YTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQI 87


>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 56/98 (57%), Positives = 62/98 (63%)
 Frame = -2

Query: 294 PILQLTSLPPTKPNNNTETIPKHEATTTXXXXXXXXXXXXXLIPKCTTLRELKQIQAYTI 115
           PILQ  S   TK N      P+HE  T               IPKCT+LRELKQIQAYTI
Sbjct: 5   PILQCVSHSLTKLNTEA---PRHEPNTAALEPPSSSILSL--IPKCTSLRELKQIQAYTI 59

Query: 114 KTHLHNDTKVLTKLINFCASNPTRASMEHARHLFDQIP 1
           KTH +N T VLTKLINFC SNPT ASM+HA  +FD+IP
Sbjct: 60  KTHQNNPT-VLTKLINFCTSNPTIASMDHAHRMFDKIP 96


>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/101 (51%), Positives = 62/101 (61%)
 Frame = -2

Query: 303 MAAPILQLTSLPPTKPNNNTETIPKHEATTTXXXXXXXXXXXXXLIPKCTTLRELKQIQA 124
           MA P   +T + P   N+NT T P                    L+PKCT+LRELKQ+QA
Sbjct: 1   MARPAPPVTPMCPPNSNSNT-THP------------------LSLLPKCTSLRELKQLQA 41

Query: 123 YTIKTHLHNDTKVLTKLINFCASNPTRASMEHARHLFDQIP 1
           + IKTHLH+D  VLTK INFC+ NPT  SM+HA HLFDQIP
Sbjct: 42  FAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIP 82


>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
           gi|449478665|ref|XP_004155385.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -2

Query: 168 IPKCTTLRELKQIQAYTIKTHLHNDTKVLTKLINFCASNPTRASMEHARHLFDQI 4
           + KCT+L ELKQIQAYTIKT+L +D  VLTKLINFC  NPT + M+HA HLFDQI
Sbjct: 36  LSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQI 90


>ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|222865177|gb|EEF02308.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/56 (66%), Positives = 47/56 (83%)
 Frame = -2

Query: 168 IPKCTTLRELKQIQAYTIKTHLHNDTKVLTKLINFCASNPTRASMEHARHLFDQIP 1
           +PKCT+L+ELKQIQA++IKTHL ND ++LTKLIN C  NPT ASM++A  LF+ IP
Sbjct: 33  LPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIP 88