BLASTX nr result

ID: Glycyrrhiza24_contig00029294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029294
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547252.1| PREDICTED: putative ribonuclease H protein A...    66   3e-09
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    58   7e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    58   7e-07

>ref|XP_003547252.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 193

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = -3

Query: 227 KCNTDGAAKGCPRPTACGGLFRDRSASILGCF*ANLGIKNAFHAELIGAMLSIEIVVTKS 48
           KCNTDGA KG P    CG +F++    +LGCF  NLG +N+   EL   +L+I +   K+
Sbjct: 50  KCNTDGAVKGNPGTAGCGDIFKNERTCVLGCFVLNLGTQNSLFVELTSVILAIGLTAKKN 109

Query: 47  RWHL*LERDSQLVVS 3
              L LE DS+L  +
Sbjct: 110 WNKLWLECDSELTAT 124


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/75 (42%), Positives = 47/75 (62%)
 Frame = -3

Query: 230 IKCNTDGAAKGCPRPTACGGLFRDRSASILGCF*ANLGIKNAFHAELIGAMLSIEIVVTK 51
           IK NTDGA+      ++CGG+FRD++A+ L CF  NLG  +A+  EL   M  +EI   +
Sbjct: 233 IKFNTDGASTATS--SSCGGVFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQR 290

Query: 50  SRWHL*LERDSQLVV 6
           +  ++ +E DS LVV
Sbjct: 291 NWRNIWIESDSALVV 305


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/71 (45%), Positives = 42/71 (59%)
 Frame = -3

Query: 230  IKCNTDGAAKGCPRPTACGGLFRDRSASILGCF*ANLGIKNAFHAELIGAMLSIEIVVTK 51
            +K NTDG+  G     ACGGLFRD S S LG F  N+G+ + FHAE +  +L++E     
Sbjct: 1023 LKVNTDGSVVG--GLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHH 1080

Query: 50   SRWHL*LERDS 18
               +L LE DS
Sbjct: 1081 GWRNLWLESDS 1091


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