BLASTX nr result

ID: Glycyrrhiza24_contig00029255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029255
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595967.1| F-box/LRR-repeat protein [Medicago truncatul...    94   1e-17
gb|ABD32495.1| Cyclin-like F-box [Medicago truncatula]                 85   5e-15
ref|XP_003618591.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    85   5e-15
ref|XP_003618580.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    85   5e-15
gb|ABN05671.1| Cyclin-like F-box [Medicago truncatula]                 85   5e-15

>ref|XP_003595967.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485015|gb|AES66218.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 487

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/134 (40%), Positives = 81/134 (60%)
 Frame = -1

Query: 409 FSSINAPQISKIYVNLSSRWEVLEEFDVPHAFDXXXXXXXXXXXSMILSPSQVARLPPTI 230
           F+SI AP++SK Y N     ++    ++PHAFD           S+ L+ SQ+  LP ++
Sbjct: 284 FNSIRAPKLSKFYWN-----DLPMNEEIPHAFDIIASLHQLQNLSINLTHSQITILPKSL 338

Query: 229 VPLQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIANQRPRRERPG 50
            P Q+LR++ELF+S  +  N D+  IL++VMA PRLQ+L+V +     +++    +E   
Sbjct: 339 GPFQYLRKLELFISD-EMPNHDFFRILDIVMASPRLQELFVTIKDLHLVSDHEHMKEPER 397

Query: 49  FSHNELKYVELHGC 8
           FSHNELKYVE  GC
Sbjct: 398 FSHNELKYVEFRGC 411


>gb|ABD32495.1| Cyclin-like F-box [Medicago truncatula]
          Length = 630

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 INAPQISKIYVNLSSRWEVLEEFDVPH-AFDXXXXXXXXXXXSMILSPSQVARLPPTIVP 224
           + AP++ K++      W   +E   PH  F            +MI+ PSQ+A L   +V 
Sbjct: 436 VKAPRLLKVF------WNATKEERYPHHLFGAIPRSRHVQNLAMIMMPSQIANLTKVLVQ 489

Query: 223 LQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIANQRPRRERPGFS 44
            Q+L+++EL +    D N DY WIL+++MA   L+KL + +       + R RRE   F 
Sbjct: 490 FQNLQQLELLIEGACDPNMDYFWILDIIMASQHLRKLSLTIRNSHVDGSHRQRREHGKFF 549

Query: 43  HNELKYVELHGCV 5
           HN LKYVEL GCV
Sbjct: 550 HNYLKYVELRGCV 562


>ref|XP_003618591.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355493606|gb|AES74809.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 640

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 INAPQISKIYVNLSSRWEVLEEFDVPH-AFDXXXXXXXXXXXSMILSPSQVARLPPTIVP 224
           + AP++ K++      W   +E   PH  F            +MI+ PSQ+A L   +V 
Sbjct: 446 VKAPRLLKVF------WNATKEERYPHHLFGAIPRSRHVQNLAMIMMPSQIANLTKVLVQ 499

Query: 223 LQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIANQRPRRERPGFS 44
            Q+L+++EL +    D N DY WIL+++MA   L+KL + +       + R RRE   F 
Sbjct: 500 FQNLQQLELLIEGACDPNMDYFWILDIIMASQHLRKLSLTIRNSHVDGSHRQRREHGKFF 559

Query: 43  HNELKYVELHGCV 5
           HN LKYVEL GCV
Sbjct: 560 HNYLKYVELRGCV 572


>ref|XP_003618580.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355493595|gb|AES74798.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 640

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 INAPQISKIYVNLSSRWEVLEEFDVPH-AFDXXXXXXXXXXXSMILSPSQVARLPPTIVP 224
           + AP++ K++      W   +E   PH  F            +MI+ PSQ+A L   +V 
Sbjct: 446 VKAPRLLKVF------WNATKEERYPHHLFGAIPRSRHVQNLAMIMMPSQIANLTKVLVQ 499

Query: 223 LQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIANQRPRRERPGFS 44
            Q+L+++EL +    D N DY WIL+++MA   L+KL + +       + R RRE   F 
Sbjct: 500 FQNLQQLELLIEGACDPNMDYFWILDIIMASQHLRKLSLTIRNSHVDGSHRQRREHGKFF 559

Query: 43  HNELKYVELHGCV 5
           HN LKYVEL GCV
Sbjct: 560 HNYLKYVELRGCV 572


>gb|ABN05671.1| Cyclin-like F-box [Medicago truncatula]
          Length = 631

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 INAPQISKIYVNLSSRWEVLEEFDVPH-AFDXXXXXXXXXXXSMILSPSQVARLPPTIVP 224
           + AP++ K++      W   +E   PH  F            +MI+ PSQ+A L   +V 
Sbjct: 437 VKAPRLLKVF------WNATKEERYPHHLFGAIPRSRHVQNLAMIMMPSQIANLTKVLVQ 490

Query: 223 LQHLREMELFLSFLQDDNDDYLWILNLVMACPRLQKLYVGVSCPDPIANQRPRRERPGFS 44
            Q+L+++EL +    D N DY WIL+++MA   L+KL + +       + R RRE   F 
Sbjct: 491 FQNLQQLELLIEGACDPNMDYFWILDIIMASQHLRKLSLTIRNSHVDGSHRQRREHGKFF 550

Query: 43  HNELKYVELHGCV 5
           HN LKYVEL GCV
Sbjct: 551 HNYLKYVELRGCV 563


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