BLASTX nr result

ID: Glycyrrhiza24_contig00029240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029240
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606478.1| RNA ligase isoform [Medicago truncatula] gi|...   197   7e-49
ref|XP_003606482.1| hypothetical protein MTR_4g060840 [Medicago ...   197   7e-49
emb|CBI16268.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258...   186   2e-45
ref|XP_002323444.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45

>ref|XP_003606478.1| RNA ligase isoform [Medicago truncatula]
           gi|355507533|gb|AES88675.1| RNA ligase isoform [Medicago
           truncatula]
          Length = 1237

 Score =  197 bits (501), Expect = 7e-49
 Identities = 91/102 (89%), Positives = 100/102 (98%)
 Frame = -2

Query: 308 FLQSHPADYSSKKLQEIVRLMREKRYPAAFKCYHNFHKVDAISSNNLFYKMVIHVHSDSA 129
           FLQ+HPADYS+KKLQE+VRL+REKRYPAAFKCYHNFHKVDAIS+++LFYKMVIHVHSDS 
Sbjct: 536 FLQAHPADYSTKKLQELVRLVREKRYPAAFKCYHNFHKVDAISNDDLFYKMVIHVHSDST 595

Query: 128 FRRYQKEMRHRPGLWPLYRGFFVDINLFKADKEKAAEISKNN 3
           FRRYQKEMR+RPGLWPLYRGFFVDINLFKADKEK AEISKN+
Sbjct: 596 FRRYQKEMRNRPGLWPLYRGFFVDINLFKADKEKVAEISKNS 637


>ref|XP_003606482.1| hypothetical protein MTR_4g060840 [Medicago truncatula]
           gi|355507537|gb|AES88679.1| hypothetical protein
           MTR_4g060840 [Medicago truncatula]
          Length = 380

 Score =  197 bits (501), Expect = 7e-49
 Identities = 91/102 (89%), Positives = 100/102 (98%)
 Frame = -2

Query: 308 FLQSHPADYSSKKLQEIVRLMREKRYPAAFKCYHNFHKVDAISSNNLFYKMVIHVHSDSA 129
           FLQ+HPADYS+KKLQE+VRL+REKRYPAAFKCYHNFHKVDAIS+++LFYKMVIHVHSDS 
Sbjct: 201 FLQAHPADYSTKKLQELVRLVREKRYPAAFKCYHNFHKVDAISNDDLFYKMVIHVHSDST 260

Query: 128 FRRYQKEMRHRPGLWPLYRGFFVDINLFKADKEKAAEISKNN 3
           FRRYQKEMR+RPGLWPLYRGFFVDINLFKADKEK AEISKN+
Sbjct: 261 FRRYQKEMRNRPGLWPLYRGFFVDINLFKADKEKVAEISKNS 302


>emb|CBI16268.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  186 bits (471), Expect = 2e-45
 Identities = 83/102 (81%), Positives = 100/102 (98%)
 Frame = -2

Query: 308 FLQSHPADYSSKKLQEIVRLMREKRYPAAFKCYHNFHKVDAISSNNLFYKMVIHVHSDSA 129
           FLQ+ PAD+S+ KLQE++RLMREKR+PAAFKCY+NFHKVD+IS++NL++KMVIHVHSDSA
Sbjct: 338 FLQARPADFSTTKLQEMIRLMREKRFPAAFKCYYNFHKVDSISADNLYFKMVIHVHSDSA 397

Query: 128 FRRYQKEMRHRPGLWPLYRGFFVDINLFKADKEKAAEISKNN 3
           FRRYQKEMR++PGLWPLYRGFFVD+NLFKA+KEKAAEI+KNN
Sbjct: 398 FRRYQKEMRYKPGLWPLYRGFFVDLNLFKANKEKAAEIAKNN 439


>ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258617 [Vitis vinifera]
          Length = 1165

 Score =  186 bits (471), Expect = 2e-45
 Identities = 83/102 (81%), Positives = 100/102 (98%)
 Frame = -2

Query: 308 FLQSHPADYSSKKLQEIVRLMREKRYPAAFKCYHNFHKVDAISSNNLFYKMVIHVHSDSA 129
           FLQ+ PAD+S+ KLQE++RLMREKR+PAAFKCY+NFHKVD+IS++NL++KMVIHVHSDSA
Sbjct: 474 FLQARPADFSTTKLQEMIRLMREKRFPAAFKCYYNFHKVDSISADNLYFKMVIHVHSDSA 533

Query: 128 FRRYQKEMRHRPGLWPLYRGFFVDINLFKADKEKAAEISKNN 3
           FRRYQKEMR++PGLWPLYRGFFVD+NLFKA+KEKAAEI+KNN
Sbjct: 534 FRRYQKEMRYKPGLWPLYRGFFVDLNLFKANKEKAAEIAKNN 575


>ref|XP_002323444.1| predicted protein [Populus trichocarpa] gi|222868074|gb|EEF05205.1|
           predicted protein [Populus trichocarpa]
          Length = 1152

 Score =  184 bits (466), Expect = 8e-45
 Identities = 81/102 (79%), Positives = 98/102 (96%)
 Frame = -2

Query: 308 FLQSHPADYSSKKLQEIVRLMREKRYPAAFKCYHNFHKVDAISSNNLFYKMVIHVHSDSA 129
           FLQ+HP+D+S+ KLQE++RLMRE+R PAAFKCYHNFHK+ ++S +NLFYK+VIHVHSDSA
Sbjct: 442 FLQAHPSDFSTTKLQEMIRLMRERRLPAAFKCYHNFHKIGSVSVDNLFYKLVIHVHSDSA 501

Query: 128 FRRYQKEMRHRPGLWPLYRGFFVDINLFKADKEKAAEISKNN 3
           FRRYQKEMR++PGLWPLYRGFFVDINLFKA+KE+AAEI+KNN
Sbjct: 502 FRRYQKEMRYKPGLWPLYRGFFVDINLFKANKERAAEIAKNN 543


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