BLASTX nr result

ID: Glycyrrhiza24_contig00029232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029232
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627312.1| Lipoxygenase [Medicago truncatula] gi|355521...   162   3e-38
gb|AFK40652.1| unknown [Medicago truncatula]                          160   1e-37
ref|XP_002534567.1| conserved hypothetical protein [Ricinus comm...    98   8e-19
ref|XP_002331197.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002304128.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>ref|XP_003627312.1| Lipoxygenase [Medicago truncatula] gi|355521334|gb|AET01788.1|
           Lipoxygenase [Medicago truncatula]
          Length = 595

 Score =  162 bits (409), Expect = 3e-38
 Identities = 84/128 (65%), Positives = 97/128 (75%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   LDHHQQTSTSLQAATITTWRRCRIPGLMRRRKVQTVRLGGKKPRRRLFGGLVRIFRRMRV 182
           LDH Q T+T+    T+TTW+  R   L RRRKVQTVRLG KKPRRR+ GG+VR+F+RMRV
Sbjct: 3   LDHKQPTTTT---TTMTTWQPRRKVSLFRRRKVQTVRLGSKKPRRRIIGGIVRMFKRMRV 59

Query: 183 XXXXXXXXXXXXXXXEHYRNLVKDMIEAGATIETFQQRLFMESTFAIPVGVNL--YPSRF 356
                          EHYRN+VKD+IEAGATIETFQQRLFMESTFA+P+GVNL  YPSRF
Sbjct: 60  KWLKLQYLRLLKRLKEHYRNVVKDLIEAGATIETFQQRLFMESTFAVPLGVNLSTYPSRF 119

Query: 357 GSDYPRTI 380
           GSDYPRT+
Sbjct: 120 GSDYPRTL 127


>gb|AFK40652.1| unknown [Medicago truncatula]
          Length = 129

 Score =  160 bits (405), Expect = 1e-37
 Identities = 83/128 (64%), Positives = 96/128 (75%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   LDHHQQTSTSLQAATITTWRRCRIPGLMRRRKVQTVRLGGKKPRRRLFGGLVRIFRRMRV 182
           LDH Q T+T+    T+TTW+  R   L RRRKVQT RLG KKPRRR+ GG+VR+F+RMRV
Sbjct: 3   LDHKQPTTTT---TTMTTWQPRRKVSLFRRRKVQTARLGSKKPRRRIIGGIVRMFKRMRV 59

Query: 183 XXXXXXXXXXXXXXXEHYRNLVKDMIEAGATIETFQQRLFMESTFAIPVGVNL--YPSRF 356
                          EHYRN+VKD+IEAGATIETFQQRLFMESTFA+P+GVNL  YPSRF
Sbjct: 60  KWLKLQYLRLLKRLKEHYRNVVKDLIEAGATIETFQQRLFMESTFAVPLGVNLSTYPSRF 119

Query: 357 GSDYPRTI 380
           GSDYPRT+
Sbjct: 120 GSDYPRTL 127


>ref|XP_002534567.1| conserved hypothetical protein [Ricinus communis]
           gi|223525015|gb|EEF27816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/100 (51%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
 Frame = +3

Query: 84  MRRRKVQTVRLGGKKPRRRLFGGLVRIFRRMRVXXXXXXXXXXXXXXXEHYRNLVKDMIE 263
           +RRRK+ T+RLGGKKPRR  F  L+R+ R++R+               E+YRNL+KD++E
Sbjct: 27  LRRRKLPTLRLGGKKPRRGSF--LIRVLRKVRLKWLKLQYSCMLRKLKEYYRNLIKDVVE 84

Query: 264 AGATIETFQQRLFMESTFAIPV-GVNLYPSRFGSDYPRTI 380
           AGATIE +QQRL ME++ A+PV G N YPS  GS  PR++
Sbjct: 85  AGATIEVYQQRLVMEASLAVPVLGFNFYPSVPGSARPRSV 124


>ref|XP_002331197.1| predicted protein [Populus trichocarpa] gi|222873318|gb|EEF10449.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/117 (40%), Positives = 65/117 (55%)
 Frame = +3

Query: 6   DHHQQTSTSLQAATITTWRRCRIPGLMRRRKVQTVRLGGKKPRRRLFGGLVRIFRRMRVX 185
           DHH+    +   AT + W   R   L RRRK+  +RLGG+KPRRR    L+R+ R  R+ 
Sbjct: 4   DHHRIPPRNTDLATTSRWPLRRRLSL-RRRKLPIIRLGGEKPRRRRMS-LLRMLRGTRLR 61

Query: 186 XXXXXXXXXXXXXXEHYRNLVKDMIEAGATIETFQQRLFMESTFAIPVGVNLYPSRF 356
                         E YRN + D+  +GATIE +QQRL ME++FA+P G+ +  S F
Sbjct: 62  WLKLRYLCMLKKLKECYRNFINDLSASGATIEAYQQRLLMETSFAVP-GMGITFSNF 117


>ref|XP_002304128.1| predicted protein [Populus trichocarpa] gi|222841560|gb|EEE79107.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/111 (42%), Positives = 71/111 (63%)
 Frame = +3

Query: 24  STSLQAATITTWRRCRIPGLMRRRKVQTVRLGGKKPRRRLFGGLVRIFRRMRVXXXXXXX 203
           +TSL  A+    RR R+   +R RK+  +RLGG+KPRRR+F  LVR+ RRMR+       
Sbjct: 11  NTSLTTASRWPLRR-RLS--IRGRKLPIIRLGGEKPRRRMF--LVRMLRRMRLRWLKLQY 65

Query: 204 XXXXXXXXEHYRNLVKDMIEAGATIETFQQRLFMESTFAIPVGVNLYPSRF 356
                   E++RNL+KDM  +G++I+ + QR+FME++FA+P G+ +  S F
Sbjct: 66  LCMLKKLKEYHRNLMKDMKVSGSSIDAYNQRIFMETSFAVP-GMGITFSNF 115


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