BLASTX nr result

ID: Glycyrrhiza24_contig00029229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029229
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534406.1| PREDICTED: structural maintenance of chromos...   154   6e-36
emb|CBI38567.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   140   1e-31
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6...   140   1e-31
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   139   3e-31

>ref|XP_003534406.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Glycine max]
          Length = 1057

 Score =  154 bits (390), Expect = 6e-36
 Identities = 82/133 (61%), Positives = 97/133 (72%)
 Frame = +2

Query: 2   ENHTVINVLVDLGSVERQVLVDDYDIGKVVAFEQRIPNLKEVFTAKGDRLFSRGSVQTTL 181
           EN TVINVLVD G+VERQVLV DY++GKVV F++RI NLKE +T  G R+F RG VQ  L
Sbjct: 561 ENQTVINVLVDHGNVERQVLVKDYEVGKVVVFDRRIRNLKEAYTEDGCRMFCRGPVQNFL 620

Query: 182 PAGKRPRVGRLSSSVEGDIEKLHNEASNEQKAANDYKRNKREAEIKLDELDKKMNSLKRL 361
               R R GRL  S E +I+KLH EAS+ +  AN  K  KR+AEIKL+ELDK MNS+KR 
Sbjct: 621 QPNMRRRTGRLCGSFEDEIKKLHAEASDVKNEANGCKNIKRKAEIKLEELDKNMNSIKRQ 680

Query: 362 CANAGKCLTSKKL 400
           C +A K LTSKKL
Sbjct: 681 CVDADKSLTSKKL 693


>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  140 bits (353), Expect = 1e-31
 Identities = 73/133 (54%), Positives = 95/133 (71%)
 Frame = +2

Query: 2   ENHTVINVLVDLGSVERQVLVDDYDIGKVVAFEQRIPNLKEVFTAKGDRLFSRGSVQTTL 181
           +N TV+NVLVD+G+ ERQVLV DY++GK VAF+QRIPNLKEV+T+ G R+FSRGSVQT L
Sbjct: 533 DNPTVMNVLVDMGNAERQVLVRDYEVGKTVAFDQRIPNLKEVYTSDGYRMFSRGSVQTIL 592

Query: 182 PAGKRPRVGRLSSSVEGDIEKLHNEASNEQKAANDYKRNKREAEIKLDELDKKMNSLKRL 361
           P  K+ R GRL SS +  I+ L   A + Q+   + KR KR AE +L +L  K+ S+KR 
Sbjct: 593 PPNKKARTGRLCSSFDSQIKDLERYALDIQEHGQEVKRKKRNAEEELQDLQDKLQSIKRR 652

Query: 362 CANAGKCLTSKKL 400
             NA + + SKKL
Sbjct: 653 RLNAERDVMSKKL 665


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  140 bits (353), Expect = 1e-31
 Identities = 73/133 (54%), Positives = 95/133 (71%)
 Frame = +2

Query: 2   ENHTVINVLVDLGSVERQVLVDDYDIGKVVAFEQRIPNLKEVFTAKGDRLFSRGSVQTTL 181
           +N TV+NVLVD+G+ ERQVLV DY++GK VAF+QRIPNLKEV+T+ G R+FSRGSVQT L
Sbjct: 563 DNPTVMNVLVDMGNAERQVLVRDYEVGKTVAFDQRIPNLKEVYTSDGYRMFSRGSVQTIL 622

Query: 182 PAGKRPRVGRLSSSVEGDIEKLHNEASNEQKAANDYKRNKREAEIKLDELDKKMNSLKRL 361
           P  K+ R GRL SS +  I+ L   A + Q+   + KR KR AE +L +L  K+ S+KR 
Sbjct: 623 PPNKKARTGRLCSSFDSQIKDLERYALDIQEHGQEVKRKKRNAEEELQDLQDKLQSIKRR 682

Query: 362 CANAGKCLTSKKL 400
             NA + + SKKL
Sbjct: 683 RLNAERDVMSKKL 695


>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
           communis] gi|223550086|gb|EEF51573.1| structural
           maintenance of chromosomes 6 smc6, putative [Ricinus
           communis]
          Length = 1058

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/133 (51%), Positives = 94/133 (70%)
 Frame = +2

Query: 2   ENHTVINVLVDLGSVERQVLVDDYDIGKVVAFEQRIPNLKEVFTAKGDRLFSRGSVQTTL 181
           EN TV+NVLVD+GS ERQVLV+DYD+GK VAF+++I NLKEV+T  G ++FSRGSVQT L
Sbjct: 563 ENDTVLNVLVDMGSAERQVLVEDYDVGKAVAFDRKIQNLKEVYTLDGYKMFSRGSVQTVL 622

Query: 182 PAGKRPRVGRLSSSVEGDIEKLHNEASNEQKAANDYKRNKREAEIKLDELDKKMNSLKRL 361
           P  K+ R GRL SS +  I+ L  +AS+ +K A + ++ KR++E  L  L + + + K  
Sbjct: 623 PPNKKARTGRLCSSYDDQIKDLEQDASHVRKKAEESRKRKRDSEANLQNLQRDLKNAKER 682

Query: 362 CANAGKCLTSKKL 400
           C NA + L SK L
Sbjct: 683 CLNAERELVSKNL 695


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/133 (53%), Positives = 94/133 (70%)
 Frame = +2

Query: 2   ENHTVINVLVDLGSVERQVLVDDYDIGKVVAFEQRIPNLKEVFTAKGDRLFSRGSVQTTL 181
           ENHTVINVL+D G  ERQVLV DY++GK VAF+QRI NLKEVFT  G ++FSRGSVQT L
Sbjct: 557 ENHTVINVLIDKGDAERQVLVKDYNVGKSVAFDQRISNLKEVFTLDGYKMFSRGSVQTIL 616

Query: 182 PAGKRPRVGRLSSSVEGDIEKLHNEASNEQKAANDYKRNKREAEIKLDELDKKMNSLKRL 361
           P  ++PR GRL SS +  I+ L  +A N ++ A   ++ KR +E +L +L+  +N+ KR 
Sbjct: 617 PPVRKPRSGRLCSSFDDQIKSLEKDALNVKQEAEQCRKRKRVSEEQLRDLEDNLNNAKRR 676

Query: 362 CANAGKCLTSKKL 400
           C +A + L SK L
Sbjct: 677 CRSAERFLMSKNL 689


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