BLASTX nr result

ID: Glycyrrhiza24_contig00029220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029220
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containin...   131   6e-29
ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containin...   130   1e-28
ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin...   115   5e-24
emb|CBI27906.3| unnamed protein product [Vitis vinifera]              115   5e-24

>ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 601

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/89 (73%), Positives = 69/89 (77%)
 Frame = +1

Query: 4   PSRRPGSENTRPSRSRECWFCLSSPNLESHLIISIGENYYLALAKGPLVEDHVLIIPVEH 183
           PSRRPGS      RS+ECWFCLSSPN+ESHLIISIGENYYLALAKGPLVEDHVLIIPVEH
Sbjct: 376 PSRRPGS-----GRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVEDHVLIIPVEH 430

Query: 184 MPNTXXXXXXXXXXXXXFQNSLKRYCKNQ 270
           MP+T             FQNSLK YCK+Q
Sbjct: 431 MPSTLSMSSESEIELSRFQNSLKSYCKSQ 459


>ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 552

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/89 (71%), Positives = 69/89 (77%)
 Frame = +1

Query: 4   PSRRPGSENTRPSRSRECWFCLSSPNLESHLIISIGENYYLALAKGPLVEDHVLIIPVEH 183
           PSRRPGS      RS+ECWFCLSSPN+ESHLIISIGENYYLALAKGPLVEDHVLIIPVEH
Sbjct: 374 PSRRPGS-----GRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVEDHVLIIPVEH 428

Query: 184 MPNTXXXXXXXXXXXXXFQNSLKRYCKNQ 270
           MP+T             FQNSL+ YCK+Q
Sbjct: 429 MPSTLSMPPESEIELSRFQNSLRSYCKSQ 457


>ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|222833259|gb|EEE71736.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/90 (63%), Positives = 64/90 (71%)
 Frame = +1

Query: 1   HPSRRPGSENTRPSRSRECWFCLSSPNLESHLIISIGENYYLALAKGPLVEDHVLIIPVE 180
           H  RR GSEN   +RS+ECWFCLSSPN+ESHLIISIGE YY AL KGPLV+DHVL+IP+E
Sbjct: 371 HSRRRRGSENDNGNRSKECWFCLSSPNVESHLIISIGEFYYCALPKGPLVQDHVLVIPIE 430

Query: 181 HMPNTXXXXXXXXXXXXXFQNSLKRYCKNQ 270
           H P T             FQNSLK Y KN+
Sbjct: 431 HAPCTLSLTQQSNSELVKFQNSLKLYYKNR 460


>ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Vitis vinifera]
          Length = 607

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/88 (63%), Positives = 63/88 (71%)
 Frame = +1

Query: 7   SRRPGSENTRPSRSRECWFCLSSPNLESHLIISIGENYYLALAKGPLVEDHVLIIPVEHM 186
           SRR GSEN + SRS+ CWFCLSSP++ESHLIISIGE+YY ALAKGPLVED VL+IPVEH 
Sbjct: 378 SRRSGSENAKSSRSKRCWFCLSSPDVESHLIISIGESYYCALAKGPLVEDQVLVIPVEHS 437

Query: 187 PNTXXXXXXXXXXXXXFQNSLKRYCKNQ 270
            NT             FQ SLK Y + Q
Sbjct: 438 ANTLSLPPECEIELDRFQKSLKMYFRTQ 465


>emb|CBI27906.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/88 (63%), Positives = 63/88 (71%)
 Frame = +1

Query: 7   SRRPGSENTRPSRSRECWFCLSSPNLESHLIISIGENYYLALAKGPLVEDHVLIIPVEHM 186
           SRR GSEN + SRS+ CWFCLSSP++ESHLIISIGE+YY ALAKGPLVED VL+IPVEH 
Sbjct: 364 SRRSGSENAKSSRSKRCWFCLSSPDVESHLIISIGESYYCALAKGPLVEDQVLVIPVEHS 423

Query: 187 PNTXXXXXXXXXXXXXFQNSLKRYCKNQ 270
            NT             FQ SLK Y + Q
Sbjct: 424 ANTLSLPPECEIELDRFQKSLKMYFRTQ 451


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