BLASTX nr result

ID: Glycyrrhiza24_contig00029206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029206
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-l...   203   1e-50
ref|XP_003541127.1| PREDICTED: WD repeat-containing protein 44-l...   192   2e-47
ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communi...   188   4e-46
ref|XP_003526075.1| PREDICTED: WD repeat-containing protein 44-l...   187   6e-46
ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44

>ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 766

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/101 (96%), Positives = 99/101 (98%)
 Frame = +3

Query: 3   GSSSEVLITSADSRIRVVDGVDLVHKFKGFRNATSQISASLTANGKYIVAASEDSHVYIW 182
           GSSSEVLITSADSRIRVVDGVDLVHKFKGFRNATS ISASLTANGKY+VAASEDSHV+IW
Sbjct: 540 GSSSEVLITSADSRIRVVDGVDLVHKFKGFRNATSPISASLTANGKYVVAASEDSHVFIW 599

Query: 183 KNEADCRPNRSKGVTVTRSYEHFHCKDVSVAIPWPGMGDVW 305
           KNEADCRPNRSKGVTVTRSYEHFHCKDVSVAIPWPGMGD W
Sbjct: 600 KNEADCRPNRSKGVTVTRSYEHFHCKDVSVAIPWPGMGDEW 640


>ref|XP_003541127.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 841

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/101 (89%), Positives = 95/101 (94%)
 Frame = +3

Query: 3   GSSSEVLITSADSRIRVVDGVDLVHKFKGFRNATSQISASLTANGKYIVAASEDSHVYIW 182
           GSSSEVLITS+DSRIR+VDGVDLVHKFKGFRNA SQISA LTANGKY+V+ASEDSHVYIW
Sbjct: 616 GSSSEVLITSSDSRIRLVDGVDLVHKFKGFRNANSQISACLTANGKYVVSASEDSHVYIW 675

Query: 183 KNEADCRPNRSKGVTVTRSYEHFHCKDVSVAIPWPGMGDVW 305
           KNEADCRPNRSKGV VT +YEHFHCKDVSVAIPWPGM D W
Sbjct: 676 KNEADCRPNRSKGVAVTSTYEHFHCKDVSVAIPWPGMDDTW 716


>ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communis]
            gi|223525645|gb|EEF28134.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 944

 Score =  188 bits (477), Expect = 4e-46
 Identities = 85/100 (85%), Positives = 98/100 (98%)
 Frame = +3

Query: 6    SSSEVLITSADSRIRVVDGVDLVHKFKGFRNATSQISASLTANGKYIVAASEDSHVYIWK 185
            SSSEVLITSADSR+RV+DGVDLVHKFKGFRNA SQISASLTANGKY+V+ASEDS+VY+WK
Sbjct: 719  SSSEVLITSADSRVRVIDGVDLVHKFKGFRNANSQISASLTANGKYVVSASEDSYVYVWK 778

Query: 186  NEADCRPNRSKGVTVTRSYEHFHCKDVSVAIPWPGMGDVW 305
            +EA+ RP+R+KGVT+TRSYEHFHC+DVSVAIPWPGMGD+W
Sbjct: 779  HEAESRPSRNKGVTITRSYEHFHCQDVSVAIPWPGMGDIW 818


>ref|XP_003526075.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 863

 Score =  187 bits (476), Expect = 6e-46
 Identities = 87/101 (86%), Positives = 95/101 (94%)
 Frame = +3

Query: 3   GSSSEVLITSADSRIRVVDGVDLVHKFKGFRNATSQISASLTANGKYIVAASEDSHVYIW 182
           GSSSEVLITS+DSRIR+VDG++LVHKFKGFRNA SQISA LTANGKY+V+ASEDSHVYIW
Sbjct: 636 GSSSEVLITSSDSRIRLVDGIELVHKFKGFRNANSQISACLTANGKYVVSASEDSHVYIW 695

Query: 183 KNEADCRPNRSKGVTVTRSYEHFHCKDVSVAIPWPGMGDVW 305
           KNEADCRP+RSKGVTVT +YEHFHCKDVSVAIPW GM D W
Sbjct: 696 KNEADCRPSRSKGVTVTSTYEHFHCKDVSVAIPWSGMDDTW 736


>ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|222869816|gb|EEF06947.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/101 (83%), Positives = 94/101 (93%)
 Frame = +3

Query: 3   GSSSEVLITSADSRIRVVDGVDLVHKFKGFRNATSQISASLTANGKYIVAASEDSHVYIW 182
           GSSSEV++TSADSRIRV+DGVDLVHKFKGFRN  SQISASLTANGKY+V+ASEDS+VY+W
Sbjct: 574 GSSSEVIVTSADSRIRVIDGVDLVHKFKGFRNTNSQISASLTANGKYVVSASEDSYVYVW 633

Query: 183 KNEADCRPNRSKGVTVTRSYEHFHCKDVSVAIPWPGMGDVW 305
           K+EAD R +RSKGVTVT SYEHFHC+D SVAIPWPGMGD W
Sbjct: 634 KHEADSRLSRSKGVTVTSSYEHFHCQDASVAIPWPGMGDTW 674


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