BLASTX nr result

ID: Glycyrrhiza24_contig00029188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029188
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   173   2e-41
ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPas...   172   4e-41
ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   171   6e-41
gb|AFK46900.1| unknown [Lotus japonicus]                              167   9e-40
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   149   4e-34

>ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 943

 Score =  173 bits (438), Expect = 2e-41
 Identities = 88/101 (87%), Positives = 92/101 (91%), Gaps = 2/101 (1%)
 Frame = -1

Query: 573  HVVIEKGQFHQERTKPASTDDMEEEDVLALLRDEETAEDRMIQTDISDEDLEKLLDRSDL 394
            HVVIEKGQFHQERTKPAS D++EE+DVLALLRDEETAED+MI TDISDEDLEKLLDRSDL
Sbjct: 843  HVVIEKGQFHQERTKPASMDEIEEDDVLALLRDEETAEDKMIHTDISDEDLEKLLDRSDL 902

Query: 393  IVNSSKDD--KAPGSTFPLKGPGWEVVIPTATGGMLSTLNS 277
            IVN   DD  KAP S FPLKGPGWEVVIPTATGGMLSTLNS
Sbjct: 903  IVNDFNDDNFKAPVSVFPLKGPGWEVVIPTATGGMLSTLNS 943


>ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPase [Medicago truncatula]
           gi|355513315|gb|AES94938.1| Swi2/Snf2-related chromatin
           remodeling ATPase [Medicago truncatula]
          Length = 750

 Score =  172 bits (436), Expect = 4e-41
 Identities = 85/99 (85%), Positives = 91/99 (91%)
 Frame = -1

Query: 573 HVVIEKGQFHQERTKPASTDDMEEEDVLALLRDEETAEDRMIQTDISDEDLEKLLDRSDL 394
           HVVIEKGQFHQERTKP+  D+MEEEDVLALLRDEETAED+MIQ DISDEDLEKLLDRSDL
Sbjct: 652 HVVIEKGQFHQERTKPSIMDEMEEEDVLALLRDEETAEDKMIQKDISDEDLEKLLDRSDL 711

Query: 393 IVNSSKDDKAPGSTFPLKGPGWEVVIPTATGGMLSTLNS 277
           ++NSS DDKA  STF LKGPGWEVV+PTA GGMLSTLNS
Sbjct: 712 VINSSTDDKAAVSTFSLKGPGWEVVMPTAAGGMLSTLNS 750


>ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 757

 Score =  171 bits (434), Expect = 6e-41
 Identities = 87/100 (87%), Positives = 91/100 (91%), Gaps = 2/100 (2%)
 Frame = -1

Query: 573 HVVIEKGQFHQERTKPASTDDMEEEDVLALLRDEETAEDRMIQTDISDEDLEKLLDRSDL 394
           HVVIEKGQFHQERTKPAS D++EE+DVLALLRDEETAED+ I TDISDEDLEKLLDRSDL
Sbjct: 657 HVVIEKGQFHQERTKPASMDEIEEDDVLALLRDEETAEDKKIHTDISDEDLEKLLDRSDL 716

Query: 393 IVNSSKDD--KAPGSTFPLKGPGWEVVIPTATGGMLSTLN 280
           IVN S DD  KAP S FPLKGPGWEVVIPTATGGMLSTLN
Sbjct: 717 IVNDSNDDNFKAPVSAFPLKGPGWEVVIPTATGGMLSTLN 756


>gb|AFK46900.1| unknown [Lotus japonicus]
          Length = 146

 Score =  167 bits (424), Expect = 9e-40
 Identities = 82/101 (81%), Positives = 93/101 (92%), Gaps = 3/101 (2%)
 Frame = -1

Query: 573 HVVIEKGQFHQERTKPASTDDMEEEDVLALLRDEETAEDRMIQTDISDEDLEKLLDRSDL 394
           HVVIEKGQFHQER+KP + ++MEE+DV ALLR+EETAED+MIQTDISDEDLEKLLDRSDL
Sbjct: 45  HVVIEKGQFHQERSKPVNVNEMEEDDVSALLRNEETAEDKMIQTDISDEDLEKLLDRSDL 104

Query: 393 IVNSSKDD---KAPGSTFPLKGPGWEVVIPTATGGMLSTLN 280
           ++NSS DD   KAPG +FPLKGPGWEVVIPTA+GGMLSTLN
Sbjct: 105 VINSSNDDENFKAPGISFPLKGPGWEVVIPTASGGMLSTLN 145


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  149 bits (375), Expect = 4e-34
 Identities = 72/102 (70%), Positives = 88/102 (86%), Gaps = 3/102 (2%)
 Frame = -1

Query: 573  HVVIEKGQFHQERTKPASTDDMEEEDVLALLRDEETAEDRMIQTDISDEDLEKLLDRSDL 394
            HVVIEKGQFHQERTKP + D +EEED+LALLR+E++AED+MIQT+ISD DLE++LDRSDL
Sbjct: 727  HVVIEKGQFHQERTKPTAADIVEEEDILALLREEDSAEDKMIQTEISDADLERILDRSDL 786

Query: 393  IVNSSKDD---KAPGSTFPLKGPGWEVVIPTATGGMLSTLNS 277
            IV +  D+   K  G+ +PLKGPGWEVVIP +TGG+LSTLNS
Sbjct: 787  IVPTGSDNEKSKVSGNLYPLKGPGWEVVIPASTGGVLSTLNS 828


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