BLASTX nr result

ID: Glycyrrhiza24_contig00029182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029182
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540924.1| PREDICTED: putative DNA repair and recombina...   530   e-148
ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   524   e-147
emb|CBI21870.3| unnamed protein product [Vitis vinifera]              524   e-147
emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]   524   e-147
ref|XP_002328055.1| chromatin remodeling complex subunit [Populu...   511   e-143

>ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Glycine max]
          Length = 870

 Score =  530 bits (1366), Expect = e-148
 Identities = 259/272 (95%), Positives = 264/272 (97%)
 Frame = +1

Query: 1    IWPYLHRDNPDGCDSCPFCIVLPCLIKLQQISNHLELIKPNPKDDPDKQMKDAEFAAAVF 180
            IWPYLHRDNPDGCDSCPFC+VLPCL+KLQQISNHLELIKPNPKDDPDKQ KDAEFAAAVF
Sbjct: 434  IWPYLHRDNPDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPKDDPDKQNKDAEFAAAVF 493

Query: 181  GPDIDLVGGNMQNESFMGLSDAKNCGKMRALEKLLFSWISHGDKVLLFSYSVRMLDILEK 360
            GPDIDLVGGN QNESFMGLSD  +CGKMRALEKLL+SW S GDKVLLFSYSVRMLDILEK
Sbjct: 494  GPDIDLVGGNTQNESFMGLSDVTHCGKMRALEKLLYSWFSQGDKVLLFSYSVRMLDILEK 553

Query: 361  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKLVFLISTRAGGLGLNLVSANRVVIFD 540
            FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSK VFLISTRAGGLGLNLVSANRVVIFD
Sbjct: 554  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 613

Query: 541  PNWNPAQDLQAQDRSFRFGQKRHVMVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEK 720
            PNWNPAQDLQAQDRSFRFGQKRHV+VFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEK
Sbjct: 614  PNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEK 673

Query: 721  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 816
            RYFEGVQDCKEFQGELFGI NLFRDLSDKLFT
Sbjct: 674  RYFEGVQDCKEFQGELFGISNLFRDLSDKLFT 705


>ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and recombination
            protein RAD26-like [Vitis vinifera]
          Length = 851

 Score =  524 bits (1350), Expect = e-147
 Identities = 252/272 (92%), Positives = 264/272 (97%)
 Frame = +1

Query: 1    IWPYLHRDNPDGCDSCPFCIVLPCLIKLQQISNHLELIKPNPKDDPDKQMKDAEFAAAVF 180
            IW YLHRDNPDGCDSCPFC+VLPCL+KL QISNHLELIKPNP+DDPDKQ KDAEFA+AVF
Sbjct: 433  IWSYLHRDNPDGCDSCPFCLVLPCLVKLLQISNHLELIKPNPRDDPDKQRKDAEFASAVF 492

Query: 181  GPDIDLVGGNMQNESFMGLSDAKNCGKMRALEKLLFSWISHGDKVLLFSYSVRMLDILEK 360
            G DIDLVGGN Q+ESFMGLSD K+CGKMRALEKL+ SW+SHGDK+LLFSYSVRMLDILEK
Sbjct: 493  GTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSHGDKILLFSYSVRMLDILEK 552

Query: 361  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKLVFLISTRAGGLGLNLVSANRVVIFD 540
            FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSK VFLISTRAGGLGLNLVSANRVVIFD
Sbjct: 553  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 612

Query: 541  PNWNPAQDLQAQDRSFRFGQKRHVMVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEK 720
            PNWNPAQDLQAQDRSFR+GQKRHV+VFRLLAAGSLEELVYSRQVYKQQLSNIA+SGKMEK
Sbjct: 613  PNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAISGKMEK 672

Query: 721  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 816
            RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT
Sbjct: 673  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 704


>emb|CBI21870.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score =  524 bits (1350), Expect = e-147
 Identities = 252/272 (92%), Positives = 264/272 (97%)
 Frame = +1

Query: 1    IWPYLHRDNPDGCDSCPFCIVLPCLIKLQQISNHLELIKPNPKDDPDKQMKDAEFAAAVF 180
            IW YLHRDNPDGCDSCPFC+VLPCL+KL QISNHLELIKPNP+DDPDKQ KDAEFA+AVF
Sbjct: 433  IWSYLHRDNPDGCDSCPFCLVLPCLVKLLQISNHLELIKPNPRDDPDKQRKDAEFASAVF 492

Query: 181  GPDIDLVGGNMQNESFMGLSDAKNCGKMRALEKLLFSWISHGDKVLLFSYSVRMLDILEK 360
            G DIDLVGGN Q+ESFMGLSD K+CGKMRALEKL+ SW+SHGDK+LLFSYSVRMLDILEK
Sbjct: 493  GTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSHGDKILLFSYSVRMLDILEK 552

Query: 361  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKLVFLISTRAGGLGLNLVSANRVVIFD 540
            FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSK VFLISTRAGGLGLNLVSANRVVIFD
Sbjct: 553  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 612

Query: 541  PNWNPAQDLQAQDRSFRFGQKRHVMVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEK 720
            PNWNPAQDLQAQDRSFR+GQKRHV+VFRLLAAGSLEELVYSRQVYKQQLSNIA+SGKMEK
Sbjct: 613  PNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAISGKMEK 672

Query: 721  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 816
            RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT
Sbjct: 673  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 704


>emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]
          Length = 874

 Score =  524 bits (1350), Expect = e-147
 Identities = 252/272 (92%), Positives = 264/272 (97%)
 Frame = +1

Query: 1    IWPYLHRDNPDGCDSCPFCIVLPCLIKLQQISNHLELIKPNPKDDPDKQMKDAEFAAAVF 180
            IW YLHRDNPDGCDSCPFC+VLPCL+KL QISNHLELIKPNP+DDPDKQ KDAEFA+AVF
Sbjct: 433  IWSYLHRDNPDGCDSCPFCLVLPCLVKLLQISNHLELIKPNPRDDPDKQRKDAEFASAVF 492

Query: 181  GPDIDLVGGNMQNESFMGLSDAKNCGKMRALEKLLFSWISHGDKVLLFSYSVRMLDILEK 360
            G DIDLVGGN Q+ESFMGLSD K+CGKMRALEKL+ SW+SHGDK+LLFSYSVRMLDILEK
Sbjct: 493  GTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSHGDKILLFSYSVRMLDILEK 552

Query: 361  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKLVFLISTRAGGLGLNLVSANRVVIFD 540
            FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSK VFLISTRAGGLGLNLVSANRVVIFD
Sbjct: 553  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 612

Query: 541  PNWNPAQDLQAQDRSFRFGQKRHVMVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEK 720
            PNWNPAQDLQAQDRSFR+GQKRHV+VFRLLAAGSLEELVYSRQVYKQQLSNIA+SGKMEK
Sbjct: 613  PNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAISGKMEK 672

Query: 721  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 816
            RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT
Sbjct: 673  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 704


>ref|XP_002328055.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222837464|gb|EEE75843.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 843

 Score =  511 bits (1316), Expect = e-143
 Identities = 245/272 (90%), Positives = 262/272 (96%)
 Frame = +1

Query: 1    IWPYLHRDNPDGCDSCPFCIVLPCLIKLQQISNHLELIKPNPKDDPDKQMKDAEFAAAVF 180
            IWPYLHRDNP+GCDSCP+C+VLPCL+KLQQISNHLELIKPNP+D+PDKQ KDAEFA+AVF
Sbjct: 430  IWPYLHRDNPEGCDSCPYCLVLPCLVKLQQISNHLELIKPNPRDEPDKQKKDAEFASAVF 489

Query: 181  GPDIDLVGGNMQNESFMGLSDAKNCGKMRALEKLLFSWISHGDKVLLFSYSVRMLDILEK 360
            G D+DLVGGN Q+E+FMGLSD K+CGKM+ALEKL+FSW S GDK+LLFSYSVRMLDILEK
Sbjct: 490  GADVDLVGGNAQSENFMGLSDVKHCGKMQALEKLMFSWASRGDKILLFSYSVRMLDILEK 549

Query: 361  FLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKLVFLISTRAGGLGLNLVSANRVVIFD 540
            FLIRKG+ FSRLDGSTPTNLRQSLVDDFNSSPSK VFLISTRAGGLGLNLVSANRVVIFD
Sbjct: 550  FLIRKGHSFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 609

Query: 541  PNWNPAQDLQAQDRSFRFGQKRHVMVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEK 720
            PNWNPAQDLQAQDRSFRFGQKRHV+VFRLLAAGS EELVYSRQVYKQQLSNIAVSGK+E 
Sbjct: 610  PNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSFEELVYSRQVYKQQLSNIAVSGKIEN 669

Query: 721  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 816
            RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT
Sbjct: 670  RYFEGVQDCKEFQGELFGICNLFRDLSDKLFT 701


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