BLASTX nr result

ID: Glycyrrhiza24_contig00029171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029171
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637980.1| Protein transport protein SEC23 [Medicago tr...    86   2e-15
ref|XP_003551946.1| PREDICTED: protein transport protein SEC23-l...    64   2e-08
ref|NP_568626.1| sec23/sec24-like transport protein [Arabidopsis...    60   2e-07
ref|XP_002863641.1| hypothetical protein ARALYDRAFT_494637 [Arab...    60   2e-07
ref|XP_004164421.1| PREDICTED: LOW QUALITY PROTEIN: protein tran...    59   4e-07

>ref|XP_003637980.1| Protein transport protein SEC23 [Medicago truncatula]
           gi|358347970|ref|XP_003638023.1| Protein transport
           protein SEC23 [Medicago truncatula]
           gi|355503915|gb|AES85118.1| Protein transport protein
           SEC23 [Medicago truncatula] gi|355503958|gb|AES85161.1|
           Protein transport protein SEC23 [Medicago truncatula]
          Length = 746

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/72 (59%), Positives = 51/72 (70%)
 Frame = +2

Query: 2   SSSSSILHLHPNVSPAFVFVVDVSTSEDEXXXXXXXXXXXXHYFPDNALVALLTFDSMVY 181
           SSSSS    HP   PAF+FV+DVSTS+DE            H+ PD ALVAL+TFDSMVY
Sbjct: 112 SSSSSSSLFHP---PAFIFVIDVSTSQDELCSLKNEILLLLHHLPDTALVALITFDSMVY 168

Query: 182 LHDLRFSHCSRL 217
           LHD++FSHCSR+
Sbjct: 169 LHDIQFSHCSRI 180


>ref|XP_003551946.1| PREDICTED: protein transport protein SEC23-like [Glycine max]
          Length = 730

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = +2

Query: 32  PNVSPAFVFVVDVSTSEDEXXXXXXXXXXXXHYFPDNALVALLTFDSMVYLHDLRFSHCS 211
           P   PAFVF++D+ST +DE            H+ PD++LV+L+TFDSMVYLH L  SH S
Sbjct: 115 PPPPPAFVFLLDLSTPQDELPPLKNQLLHLLHHLPDHSLVSLITFDSMVYLHHLSSSHFS 174

Query: 212 RL 217
            L
Sbjct: 175 SL 176


>ref|NP_568626.1| sec23/sec24-like transport protein [Arabidopsis thaliana]
           gi|28058769|gb|AAO29951.1| Unknown protein [Arabidopsis
           thaliana] gi|34098821|gb|AAQ56793.1| At5g43670
           [Arabidopsis thaliana] gi|332007610|gb|AED94993.1|
           sec23/sec24-like transport protein [Arabidopsis
           thaliana]
          Length = 794

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +2

Query: 38  VSPAFVFVVDVSTSEDEXXXXXXXXXXXXHYFPDNALVALLTFDSMVYLHDLRFSHCSRL 217
           + PAFVFVVD S  EDE               P+N LVAL+TFDSMV ++DL FS CS++
Sbjct: 168 LGPAFVFVVDASMVEDELRAVRSDVLFVIEQLPENCLVALITFDSMVRVYDLGFSECSKV 227


>ref|XP_002863641.1| hypothetical protein ARALYDRAFT_494637 [Arabidopsis lyrata subsp.
           lyrata] gi|297309476|gb|EFH39900.1| hypothetical protein
           ARALYDRAFT_494637 [Arabidopsis lyrata subsp. lyrata]
          Length = 793

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +2

Query: 38  VSPAFVFVVDVSTSEDEXXXXXXXXXXXXHYFPDNALVALLTFDSMVYLHDLRFSHCSRL 217
           + PAFVFVVD S  EDE               P+N LVAL+TFDSMV ++DL FS CS++
Sbjct: 167 LGPAFVFVVDASMVEDELRAVRSELLFVIEQLPENCLVALITFDSMVRVYDLGFSDCSKV 226


>ref|XP_004164421.1| PREDICTED: LOW QUALITY PROTEIN: protein transport protein
           SEC23-like [Cucumis sativus]
          Length = 783

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = +2

Query: 44  PAFVFVVDVSTSEDEXXXXXXXXXXXXHYFPDNALVALLTFDSMVYLHDLRFSHCSRL 217
           PAFVFVVD  + E E             + P+NALV L++FDSMV+++DL+FS CSR+
Sbjct: 162 PAFVFVVDSCSVEKELQTLKNELLLVVEHLPENALVGLISFDSMVHVYDLKFSECSRV 219


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