BLASTX nr result

ID: Glycyrrhiza24_contig00029169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029169
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   135   3e-30
emb|CBI34953.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...    88   6e-16
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...    88   8e-16
ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cuc...    84   9e-15

>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
            max]
          Length = 1707

 Score =  135 bits (341), Expect = 3e-30
 Identities = 77/115 (66%), Positives = 83/115 (72%)
 Frame = -2

Query: 347  KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168
            K ETQLRLEAFY+FNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAE  SKSRK  R   
Sbjct: 1296 KRETQLRLEAFYNFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAEEFSKSRKTGR--- 1352

Query: 167  VEPGDNKLETSKGTEESLAGXXXXXXXXXXXXKNDEDTVAKARTKKKKINDDPSS 3
             EP D  LETS+G E +L G                DTVAK ++KKKK+NDDPSS
Sbjct: 1353 -EPEDITLETSRGIEGNLEG----RRKSKIKQSRKNDTVAKEQSKKKKVNDDPSS 1402


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/69 (68%), Positives = 53/69 (76%)
 Frame = -2

Query: 347  KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168
            KHETQLRLEAFY+FNERFAKIRSKRIKKAVKGITG Q S+L+DD+ +  SK  K  +  S
Sbjct: 1040 KHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSK-ES 1098

Query: 167  VEPGDNKLE 141
                DNK E
Sbjct: 1099 PSKLDNKQE 1107


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/69 (68%), Positives = 53/69 (76%)
 Frame = -2

Query: 347  KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168
            KHETQLRLEAFY+FNERFAKIRSKRIKKAVKGITG Q S+L+DD+ +  SK  K  +  S
Sbjct: 1104 KHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSK-ES 1162

Query: 167  VEPGDNKLE 141
                DNK E
Sbjct: 1163 PSKLDNKQE 1171


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
            gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
            putative [Ricinus communis]
          Length = 1641

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/66 (65%), Positives = 55/66 (83%)
 Frame = -2

Query: 347  KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168
            KHETQLRLEAFY+FNERFAKIRS+RIKKA+KGITG Q S+++DD  ++ SKSRK     +
Sbjct: 1234 KHETQLRLEAFYTFNERFAKIRSRRIKKALKGITGYQSSEMMDDDVKDSSKSRKKR---T 1290

Query: 167  VEPGDN 150
            + PG++
Sbjct: 1291 IGPGES 1296


>ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
            gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair
            protein UVH3-like [Cucumis sativus]
          Length = 1541

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = -2

Query: 347  KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168
            KHETQLRLEAFY+FNERFAKIRSKRIKKAVK ITG + + L+DD+  + S +  N+R  S
Sbjct: 1149 KHETQLRLEAFYTFNERFAKIRSKRIKKAVKSITGSRSAVLMDDAVRDASVN--NQRELS 1206

Query: 167  VEPGDN 150
            VEP +N
Sbjct: 1207 VEPKEN 1212


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