BLASTX nr result
ID: Glycyrrhiza24_contig00029169
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00029169 (348 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 135 3e-30 emb|CBI34953.3| unnamed protein product [Vitis vinifera] 88 6e-16 ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit... 88 6e-16 ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c... 88 8e-16 ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cuc... 84 9e-15 >ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine max] Length = 1707 Score = 135 bits (341), Expect = 3e-30 Identities = 77/115 (66%), Positives = 83/115 (72%) Frame = -2 Query: 347 KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168 K ETQLRLEAFY+FNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAE SKSRK R Sbjct: 1296 KRETQLRLEAFYNFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAEEFSKSRKTGR--- 1352 Query: 167 VEPGDNKLETSKGTEESLAGXXXXXXXXXXXXKNDEDTVAKARTKKKKINDDPSS 3 EP D LETS+G E +L G DTVAK ++KKKK+NDDPSS Sbjct: 1353 -EPEDITLETSRGIEGNLEG----RRKSKIKQSRKNDTVAKEQSKKKKVNDDPSS 1402 >emb|CBI34953.3| unnamed protein product [Vitis vinifera] Length = 1449 Score = 88.2 bits (217), Expect = 6e-16 Identities = 47/69 (68%), Positives = 53/69 (76%) Frame = -2 Query: 347 KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168 KHETQLRLEAFY+FNERFAKIRSKRIKKAVKGITG Q S+L+DD+ + SK K + S Sbjct: 1040 KHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSK-ES 1098 Query: 167 VEPGDNKLE 141 DNK E Sbjct: 1099 PSKLDNKQE 1107 >ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera] Length = 1513 Score = 88.2 bits (217), Expect = 6e-16 Identities = 47/69 (68%), Positives = 53/69 (76%) Frame = -2 Query: 347 KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168 KHETQLRLEAFY+FNERFAKIRSKRIKKAVKGITG Q S+L+DD+ + SK K + S Sbjct: 1104 KHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSK-ES 1162 Query: 167 VEPGDNKLE 141 DNK E Sbjct: 1163 PSKLDNKQE 1171 >ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis] gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3, putative [Ricinus communis] Length = 1641 Score = 87.8 bits (216), Expect = 8e-16 Identities = 43/66 (65%), Positives = 55/66 (83%) Frame = -2 Query: 347 KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168 KHETQLRLEAFY+FNERFAKIRS+RIKKA+KGITG Q S+++DD ++ SKSRK + Sbjct: 1234 KHETQLRLEAFYTFNERFAKIRSRRIKKALKGITGYQSSEMMDDDVKDSSKSRKKR---T 1290 Query: 167 VEPGDN 150 + PG++ Sbjct: 1291 IGPGES 1296 >ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus] gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus] Length = 1541 Score = 84.3 bits (207), Expect = 9e-15 Identities = 44/66 (66%), Positives = 53/66 (80%) Frame = -2 Query: 347 KHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAENLSKSRKNERGSS 168 KHETQLRLEAFY+FNERFAKIRSKRIKKAVK ITG + + L+DD+ + S + N+R S Sbjct: 1149 KHETQLRLEAFYTFNERFAKIRSKRIKKAVKSITGSRSAVLMDDAVRDASVN--NQRELS 1206 Query: 167 VEPGDN 150 VEP +N Sbjct: 1207 VEPKEN 1212